RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 HACD4Q5VWC8 232 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 OOSP2Q86WS3 158 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 SLC22A24Q8N4F4 322 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 DEFB125Q8N687 156 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 PXT1Q8NFP0 134 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 OR10P1Q8NGE3 313 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 OR2T27Q8NH04 317 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 FNDC9Q8TBE3 224 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 GPR119Q8TDV5 335 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 GNPNAT1Q96EK6 184 aaPredicted RBP1.32□□□□□ -2.2
SUB1-204ENST00000504016 CNBD2Q96M20 576 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 CCL13Q99616 98 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 SIGMAR1Q99720 223 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 CCDC90BQ9GZT6 254 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 DCSTAMPQ9H295 470 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 RSL24D1Q9UHA3 163 aaKnown RBP1.32□□□□□ -2.2
SUB1-204ENST00000504016 SNX12Q9UMY4 172 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 KIF15Q9NS87 1388 aa1.32□□□□□ -2.2
SUB1-204ENST00000504016 ARAP3Q8WWN8 1544 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 SORL1Q92673 2214 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 CEP170Q5SW79 1584 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 LOC102725191A0A1B0GVB3 256 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 KNCNA6PVL3 124 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 J3QRK9 145 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 M0R381 172 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 BHLHE40O14503 412 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 UBFD1O14562 309 aaKnown RBP1.31□□□□□ -2.2
SUB1-204ENST00000504016 PDE6DO43924 150 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 PFDN1O60925 122 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 CRYZL1O95825 349 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 REG1AP05451 166 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 CRYGDP07320 174 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 SLC25A16P16260 332 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 PPP1R2P41236 205 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 FXYD7P58549 80 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 RAB14P61106 215 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 AP1S1P61966 158 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 TBPL1P62380 186 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 IFITM2Q01629 132 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 BSPH1Q075Z2 132 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 KRR1Q13601 381 aaKnown RBP1.31□□□□□ -2.2
SUB1-204ENST00000504016 MRPL51Q4U2R6 128 aaKnown RBP1.31□□□□□ -2.2
SUB1-204ENST00000504016 C1orf194Q5T5A4 169 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 TEX36Q5VZQ5 186 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 PPP1R2P3Q6NXS1 205 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 LPCAT3Q6P1A2 487 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 SLC36A1Q7Z2H8 476 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 TBC1D19Q8N5T2 526 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 ZFAND2AQ8N6M9 145 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 OR4C16Q8NGL9 310 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 OR10A6Q8NH74 314 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 LHFPL5Q8TAF8 219 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 CD200R1Q8TD46 325 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 GNPDA2Q8TDQ7 276 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 CT55Q8WUE5 264 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 DGCR14Q96DF8 476 aaKnown RBP1.31□□□□□ -2.2
SUB1-204ENST00000504016 SFRP2Q96HF1 295 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 CAPZA3Q96KX2 299 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 OR52B2Q96RD2 323 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 PRRT1Q99946 306 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 TMEM70Q9BUB7 260 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 SMDT1Q9H4I9 107 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 XAGE1AQ9HD64 81 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 TXNL4BQ9NX01 149 aaKnown RBP1.31□□□□□ -2.2
SUB1-204ENST00000504016 PRELID1Q9Y255 219 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 MRPS16Q9Y3D3 137 aaKnown RBP1.31□□□□□ -2.2
SUB1-204ENST00000504016 FAM32AQ9Y421 112 aaKnown RBP1.31□□□□□ -2.2
SUB1-204ENST00000504016 ADAMTS7Q9UKP4 1686 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 TRPM3Q9HCF6 1732 aaPredicted RBP1.31□□□□□ -2.2
SUB1-204ENST00000504016 ROCK1Q13464 1354 aa1.31□□□□□ -2.2
SUB1-204ENST00000504016 A0A087WUJ7 227 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 TMED7-TICAM2A0A0A6YYA0 188 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 A0A0J9YX75 114 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 OR4C46A6NHA9 309 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 ZNF860A6NHJ4 632 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 AIPO00170 330 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 PIRO00625 290 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 CNIH1O95406 144 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 HLA-DRB1P01911 266 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 SERPINA7P05543 415 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 CST2P09228 141 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 RBP1P09455 135 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 UCHL1P09936 223 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 ZNF705DP0CH99 300 aaPredicted RBP1.3□□□□□ -2.2
SUB1-204ENST00000504016 HIST1H1TP22492 207 aaPredicted RBP1.3□□□□□ -2.2
SUB1-204ENST00000504016 MAP2K4P45985 399 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 RPL27AP46776 148 aaKnown RBP1.3□□□□□ -2.2
SUB1-204ENST00000504016 REG1BP48304 166 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 TCTAP57738 103 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 LINC00313P59037 77 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 TSPEAR-AS2P59090 65 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 FAM229BQ4G0N7 80 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 TRIQKQ629K1 86 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 TMEM42Q69YG0 159 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 RASL11AQ6T310 242 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 ANKRD29Q8N6D5 301 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 OR51D1Q8NGF3 324 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 OR13C8Q8NGS7 320 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 OR10X1Q8NGY0 326 aa1.3□□□□□ -2.2
SUB1-204ENST00000504016 RAB2BQ8WUD1 216 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms