RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 SAA2P0DJI9 122 aaPredicted RBP9.89□□□□□ -0.83
NUP54-202ENST00000502850 ATP5IP56385 69 aaPredicted RBP9.89□□□□□ -0.83
NUP54-202ENST00000502850 MRPS11P82912 194 aaKnown RBP9.89□□□□□ -0.83
NUP54-202ENST00000502850 RELBQ01201 579 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 RTL8BQ17RB0 113 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 WFDC8Q8IUA0 241 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 ZFP82Q8N141 532 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 CISD2Q8N5K1 135 aaKnown RBP9.89□□□□□ -0.83
NUP54-202ENST00000502850 C2CD4CQ8TF44 421 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 JKAMPQ9P055 326 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 NAT8Q9UHE5 227 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 TP53TG5Q9Y2B4 290 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 ZNF835Q9Y2P0 537 aa9.89□□□□□ -0.83
NUP54-202ENST00000502850 hCG_1809904A0A1W2PP81 198 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 A0A1W2PR64 198 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 A0A1W2PRV1 198 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 C5orf52A6NGY3 159 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 ZNF727A8MUV8 499 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 SEC14L6B5MCN3 397 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 UBE2CO00762 179 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 OPRK1P41145 380 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 VDAC2P45880 294 aaPredicted RBP9.88□□□□□ -0.83
NUP54-202ENST00000502850 CDC34P49427 236 aaPredicted RBP9.88□□□□□ -0.83
NUP54-202ENST00000502850 ZNF134P52741 427 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 TFF3Q07654 80 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 SPRNQ5BIV9 151 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 CT45A1Q5HYN5 189 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 ADAM5Q6NVV9 412 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 CYP2G1PQ6ZSU1 146 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 SSX7Q7RTT5 188 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 ZNF439Q8NDP4 499 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 OR13D1Q8NGV5 346 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 CT45A3Q8NHU0 189 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 TXNDC17Q9BRA2 123 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 SLC25A22Q9H936 323 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 METTL1Q9UBP6 276 aaKnown RBP9.88□□□□□ -0.83
NUP54-202ENST00000502850 RPUSD1Q9UJJ7 312 aaKnown RBP9.88□□□□□ -0.83
NUP54-202ENST00000502850 PRNDQ9UKY0 176 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 TCF19Q9Y242 345 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 HCFC1P51610 2035 aa9.88□□□□□ -0.83
NUP54-202ENST00000502850 SVILO95425 2214 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 CLDN34H7C241 214 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 KBTBD11O94819 623 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 FBP1P09467 338 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
NUP54-202ENST00000502850 RAB31Q13636 194 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 SLC25A48Q6ZT89 311 aaKnown RBP9.87□□□□□ -0.83
NUP54-202ENST00000502850 SSX9Q7RTT3 188 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 LYG1Q8N1E2 194 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 CCL13Q99616 98 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 SDF2L1Q9HCN8 221 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 FKBP11Q9NYL4 201 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 ZNF257Q9Y2Q1 563 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 CACNA1DQ01668 2161 aa9.87□□□□□ -0.83
NUP54-202ENST00000502850 SLC31A2O15432 143 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 IGKV1D-33P01593 117 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 IGKV1-33P01594 117 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 GYPAP02724 150 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 OPN1MWP04001 364 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 S100A9P06702 114 aaKnown RBP9.86□□□□□ -0.83
NUP54-202ENST00000502850 OR4A8P0C604 315 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 OPN1MW2P0DN77 364 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 OPN1MW3P0DN78 364 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 RND2P52198 227 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
NUP54-202ENST00000502850 ELOBQ15370 118 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 ADIPOQQ15848 244 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 SPINK9Q5DT21 86 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 FAM71F2Q6NXP2 309 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 RAB24Q969Q5 203 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 NEIL1Q96FI4 390 aaPredicted RBP9.86□□□□□ -0.83
NUP54-202ENST00000502850 PLPPR2Q96GM1 343 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 RHOVQ96L33 236 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 SMIM7Q9BQ49 75 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 SAP30LQ9HAJ7 183 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 TMEM14BQ9NUH8 114 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 PRR14LQ5THK1 2151 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 DYSFO75923 2080 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 DSCAMO60469 2012 aa9.86□□□□□ -0.83
NUP54-202ENST00000502850 A0A1W2PPV4 95 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 ZNF98A6NK75 572 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 PDE6DO43924 150 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 SMIM6P0DI80 62 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 NPY1RP25929 384 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 RPS10P46783 165 aaKnown RBP9.85□□□□□ -0.83
NUP54-202ENST00000502850 LINC00205P59089 165 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 SNRPEP62304 92 aaKnown RBP9.85□□□□□ -0.83
NUP54-202ENST00000502850 BSPH1Q075Z2 132 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 FAM201AQ5SY85 155 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 WDR25Q64LD2 544 aaPredicted RBP9.85□□□□□ -0.83
NUP54-202ENST00000502850 OR4A47Q6IF82 309 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 FAM216BQ8N7L0 139 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 DEFB108BQ8NET1 73 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 SLC24A4Q8NFF2 622 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 NPVFQ9HCQ7 196 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 SLC25A10Q9UBX3 287 aaPredicted RBP9.85□□□□□ -0.83
NUP54-202ENST00000502850 PPIAL4EA0A075B759 164 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 DPRXA6NFQ7 191 aa9.85□□□□□ -0.83
NUP54-202ENST00000502850 PPIAL4DF5H284 164 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms