RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CT45A1Q5HYN5 189 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 C1orf185Q5T7R7 199 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 IGFL3Q6UXB1 125 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 TCF23Q7RTU1 214 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 HIST3H2BBQ8N257 126 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 ABHD12Q8N2K0 398 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 OR52E5Q8NH55 327 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 CT45A3Q8NHU0 189 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 GPR61Q9BZJ8 451 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 HEYLQ9NQ87 328 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-204ENST00000501271 GAR1Q9NY12 217 aaKnown RBP8.13□□□□□ -1.11
CLIP1-204ENST00000501271 DYSFO75923 2080 aa8.13□□□□□ -1.11
CLIP1-204ENST00000501271 C11orf94C9JXX5 98 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 CDPF1Q6NVV7 123 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 OR51G1Q8NGK1 321 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 FAM222BQ8WU58 562 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 NEIL1Q96FI4 390 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-204ENST00000501271 MGST2Q99735 147 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 ELOVL1Q9BW60 279 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 MS4A5Q9H3V2 200 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 PATZ1Q9HBE1 687 aaKnown RBP8.12□□□□□ -1.11
CLIP1-204ENST00000501271 GCM1Q9NP62 436 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 GFOD1Q9NXC2 390 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 TCF19Q9Y242 345 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 KBTBD11-OT1A0A1B0GTJ5 212 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 PPP1R2P9O14990 202 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 GYPAP02724 150 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 S100A2P29034 98 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 GATA4P43694 442 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 ATP5G3P48201 142 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 UBE2G2P60604 165 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 RPP30P78346 268 aaKnown RBP8.12□□□□□ -1.11
CLIP1-204ENST00000501271 Q6ZS92 163 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 OR4S2Q8NH73 311 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 PYGO2Q9BRQ0 406 aa8.12□□□□□ -1.11
CLIP1-204ENST00000501271 CEP250Q9BV73 2442 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 C15orf61A6NNL5 157 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 H7BYZ3 331 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 TGOLN2O43493 480 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 NDUFS6O75380 124 aaKnown RBP8.11□□□□□ -1.11
CLIP1-204ENST00000501271 IGHV1-46P01743 117 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 IGHV2-70P01814 119 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 S100PP25815 95 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 KIR2DS2P43631 304 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 GALR1P47211 349 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 FAM27E3Q08E93 113 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 C3orf36Q3SXR2 165 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 STUMQ69YW2 141 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 TGIF2LYQ8IUE0 185 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 DEFB108BQ8NET1 73 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 OR10A7Q8NGE5 316 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 RAB1CQ92928 201 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 C1orf159Q96HA4 380 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 GGTLC1Q9BX51 225 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 GAB2Q9UQC2 676 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 ELOA3CA0A087WX78 387 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-204ENST00000501271 TRGV8A0A0C4DH27 118 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 ITGB1BP1O14713 200 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 MPDU1O75352 247 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 LY86O95711 162 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 TIMP3P35625 211 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 OPRK1P41145 380 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 RAB7AP51149 207 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 TMPRSS3P57727 454 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 GNB1P62873 340 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 TNFAIP6P98066 277 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-204ENST00000501271 CLEC12BQ2HXU8 276 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 MIC13Q5XKP0 118 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 OR4A47Q6IF82 309 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 FAM216BQ8N7L0 139 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 RBMXL3Q8N7X1 1067 aaKnown RBP8.11□□□□□ -1.11
CLIP1-204ENST00000501271 ZNF383Q8NA42 475 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 OR10D4PQ8NGN7 298 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 OR4X1Q8NH49 305 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 SDSLQ96GA7 329 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 RHOVQ96L33 236 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 GAFA1Q96PS6 74 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 SRD5A3Q9H8P0 318 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 DCAF16Q9NXF7 216 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 RNF7Q9UBF6 113 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 PXMP4Q9Y6I8 212 aa8.11□□□□□ -1.11
CLIP1-204ENST00000501271 A0A1W2PPV4 95 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 TM4SF5O14894 197 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 MMP23AO75900 390 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 MYOD1P15172 320 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 GNG10P50151 68 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 LYG1Q8N1E2 194 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 ZNF439Q8NDP4 499 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 OR5T1Q8NG75 326 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 SNRNP40Q96DI7 357 aaKnown RBP8.1□□□□□ -1.11
CLIP1-204ENST00000501271 CCL13Q99616 98 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 DERL1Q9BUN8 251 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 NCOR1P1Q9H4R4 102 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 TNCP24821 2201 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 TRGV10A0A0A0MS01 117 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 HRASP01112 189 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 ARL14EPLP0DKL9 152 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 COL8A2P25067 703 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 CCKARP32238 428 aa8.1□□□□□ -1.11
CLIP1-204ENST00000501271 TMEM249Q2WGJ8 235 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms