RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 CDS2O95674 445 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 UCP1P25874 307 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 CCKARP32238 428 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 UCNP55089 124 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF818PQ6ZRF7 136 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 RDH5Q92781 318 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 TMEM186Q96B77 213 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 LYRM2Q9NU23 88 aaPredicted RBP9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 TAAR3PQ9P1P4 343 aa9.66□□□□□ -0.86
SNRNP200-208ENST00000497539 ESPL1Q14674 2120 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 IGKV1D-13A0A0B4J2D9 117 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 PPP5D1E7EU14 171 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 H0Y980 276 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 PRRG2O14669 202 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 HS3ST1O14792 307 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 IGKV1-13P0DP09 117 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 OR10J1P30954 320 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 TMEM267Q0VDI3 215 aaPredicted RBP9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF506Q5JVG8 444 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 NUP37Q8NFH4 326 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 OR5D13Q8NGL4 314 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 RSG1Q9BU20 258 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 ZNF665Q9H7R5 613 aa9.65□□□□□ -0.86
SNRNP200-208ENST00000497539 TMEM30CPA0ZSE6 113 aa9.65□□□□□ -0.87
SNRNP200-208ENST00000497539 HSPB1P04792 205 aaKnown RBP9.65□□□□□ -0.87
SNRNP200-208ENST00000497539 CD55P08174 381 aa9.65□□□□□ -0.87
SNRNP200-208ENST00000497539 PRR27Q6MZM9 219 aa9.65□□□□□ -0.87
SNRNP200-208ENST00000497539 GPR146Q96CH1 333 aa9.65□□□□□ -0.87
SNRNP200-208ENST00000497539 PPP1R3CQ9UQK1 317 aa9.65□□□□□ -0.87
SNRNP200-208ENST00000497539 TNFRSF18Q9Y5U5 241 aa9.65□□□□□ -0.87
SNRNP200-208ENST00000497539 SIRPB1O00241 398 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 GRPP07492 148 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 OR5G3P0C626 314 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 GATA4P43694 442 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 RIPPLY3P57055 190 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 TMPRSS3P57727 454 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 IGFBP7Q16270 282 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 MSMPQ1L6U9 139 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 WDR25Q64LD2 544 aaPredicted RBP9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 NECAP1Q8NC96 275 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 SMDT1Q9H4I9 107 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 CCL28Q9NRJ3 127 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 PPIAL4EA0A075B759 164 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 PPIAL4CA0A0B4J2A2 164 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 A0A0G2JNJ9 132 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 PPIAL4DF5H284 164 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 CRYAAP02489 173 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 PPIAL4FP0DN26 164 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 PPIAL4GP0DN37 164 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 SLC25A6P12236 298 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 BMP5P22003 454 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 ZNF83P51522 516 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 BATFQ16520 125 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 STPG4Q8N801 248 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 MEGF9Q9H1U4 602 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 Q9UFV3 132 aa9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 CHD3Q12873 2000 aaKnown RBP9.64□□□□□ -0.87
SNRNP200-208ENST00000497539 A0A0G2JRQ6 117 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 PGPEP1LA6NFU8 196 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 SRRM5B3KS81 715 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 PAX9P55771 341 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 TESK1Q15569 626 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 FAM90A2PQ658T7 463 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 SP5Q6BEB4 398 aaPredicted RBP9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 TRAT1Q6PIZ9 186 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 WFDC8Q8IUA0 241 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 OR1P1Q8NH06 330 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 SPIN2AQ99865 258 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 SPIN2BQ9BPZ2 258 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 RBKSQ9H477 322 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 RPRMQ9NS64 109 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 DIDO1Q9BTC0 2240 aaKnown RBP9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 M0R1B8 84 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 GFRA3O60609 400 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 PGLYRP1O75594 196 aaPredicted RBP9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 S100GP29377 79 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 FABP6P51161 128 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 OR10V1Q8NGI7 309 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 GNPNAT1Q96EK6 184 aaPredicted RBP9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 NBEAQ8NFP9 2946 aa9.63□□□□□ -0.87
SNRNP200-208ENST00000497539 LOC102723971A0A1B0GUV8 181 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 NMSQ5H8A3 153 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 OR51H1Q8NH63 302 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 GVINP1Q7Z2Y8 2422 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 INTS1Q8N201 2190 aaKnown RBP9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 GTF3C1Q12789 2109 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 OOEPA6NGQ2 149 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 HMGB3O15347 200 aaKnown RBP9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 PSPNO60542 156 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 LHBP01229 141 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 IGLV2-14P01704 120 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 ADH4P08319 380 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 CEACAM3P40198 252 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 TAS2R30P59541 319 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 ID3Q02535 119 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 CR1LQ2VPA4 569 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 ZBTB34Q8NCN2 500 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 OR6C3Q9NZP0 311 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 RNF115Q9Y4L5 304 aa9.62□□□□□ -0.87
SNRNP200-208ENST00000497539 CLDN34H7C241 214 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms