RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 OR52E4Q8NGH9 312 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR5L1Q8NGL2 311 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR1J4Q8NGS1 313 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR9A2Q8NGT5 310 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SPPL2BQ8TCT7 592 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 RNASEH2CQ8TDP1 164 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 ORAOV1Q8WV07 137 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SKA2Q8WVK7 121 aaPredicted RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 RGP1Q92546 391 aaPredicted RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 TFGQ92734 400 aaPredicted RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 APH1AQ96BI3 265 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 FLYWCH2Q96CP2 140 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 MRPS24Q96EL2 167 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 PPP1R36Q96LQ0 422 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ZNF681Q96N22 645 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 MBOAT7Q96N66 472 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 RBP7Q96R05 134 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 KLF6Q99612 283 aaPredicted RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 UTP23Q9BRU9 249 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 TMEM208Q9BTX3 173 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 POTEKPQ9BYX7 375 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 REG4Q9BYZ8 158 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 CHST5Q9GZS9 411 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 NAA50Q9GZZ1 169 aaKnown RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 OR2AG1Q9H205 316 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SMDT1Q9H4I9 107 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 DUSP21Q9H596 190 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ACOT13Q9NPJ3 140 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ZNF302Q9NR11 478 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 LYRM2Q9NU23 88 aaPredicted RBP1.52□□□□□ -2.17
CBX3-208ENST00000497498 C1orf109Q9NX04 203 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TAS2R13Q9NYV9 303 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ZNRD1Q9P1U0 126 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 DKKL1Q9UK85 242 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ZFP30Q9Y2G7 519 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ZNF337Q9Y3M9 751 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 MMACHCQ9Y4U1 282 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 ARL5AQ9Y689 179 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 DOCK8Q8NF50 2099 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 PIKFYVEQ9Y2I7 2098 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 SACSQ9NZJ4 4579 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 DNAH1Q9P2D7 4330 aa1.52□□□□□ -2.17
CBX3-208ENST00000497498 TRAV8-7A0A075B6U6 113 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 A0A087WUJ7 227 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 TRBV9A0A0B4J1U6 114 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 A0A1B0GTI1 187 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 LOC100130705A0A1B0GUX0 176 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 TMEM269A0A1B0GVZ9 245 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 KANTRA0A1W2PQU2 76 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 ARL5CA6NH57 179 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 OR5H1A6NKK0 313 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 SNRPGP15A8MWD9 76 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 A8MWP6 167 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 ZNF670-ZNF695F2Z2N8 137 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 F6UZH7 168 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 SMLR1H3BR10 107 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 J3QR89 54 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 UPK1AO00322 258 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 SLC17A3O00476 420 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 MFNGO00587 321 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 GNGT2O14610 69 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 SLC16A4O15374 487 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 ARPC5O15511 151 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 CYB5BO43169 146 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 SSNA1O43805 119 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 KLRC4O43908 158 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 CREBL2O60519 120 aaPredicted RBP1.51□□□□□ -2.17
CBX3-208ENST00000497498 HPGDSO60760 199 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 FCN3O75636 299 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 OR2J2O76002 312 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 OR2F2O95006 317 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 CD160O95971 181 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 PDYNP01213 254 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 IL5P05113 134 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 CRYBA1P05813 215 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 CSN2P05814 226 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 NBEAP1P0C6P0 100 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 CISD3P0C7P0 127 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 SMIM17P0DL12 118 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 SULT1A3P0DMM9 295 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 SULT1A4P0DMN0 295 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 PIPP12273 146 aaPredicted RBP1.51□□□□□ -2.17
CBX3-208ENST00000497498 MUC1P15941 1255 aaPredicted RBP1.51□□□□□ -2.17
CBX3-208ENST00000497498 SPNP16150 400 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 TUBG1P23258 451 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 NFYAP23511 347 aaPredicted RBP1.51□□□□□ -2.17
CBX3-208ENST00000497498 CMPK1P30085 196 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 RBM34P42696 430 aaKnown RBP1.51□□□□□ -2.17
CBX3-208ENST00000497498 KCNJ3P48549 501 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 EMP2P54851 167 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 ARPP19P56211 112 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 CLDN18P56856 261 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 DNAJB13P59910 316 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 ACTBP60709 375 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 RPS15AP62244 130 aaKnown RBP1.51□□□□□ -2.17
CBX3-208ENST00000497498 SNRPD2P62316 118 aaKnown RBP1.51□□□□□ -2.17
CBX3-208ENST00000497498 RAB11AP62491 216 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 RBX1P62877 108 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 ACTG1P63261 375 aa1.51□□□□□ -2.17
CBX3-208ENST00000497498 HBA1P69905 142 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms