RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 NCKAP5O14513 1909 aa1.27□□□□□ -2.21
PHC3-216ENST00000497171 GBF1Q92538 1859 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 COL11A1P12107 1806 aaPredicted RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 ZNF532Q9HCE3 1301 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 TRAV38-1A0A0B4J264 116 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 IGHV1-69-2A0A0G2JMI3 117 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 I3L521 148 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 TGOLN2O43493 480 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 ISG15P05161 165 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 FAM228BP0C875 321 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 DEFA4P12838 97 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 PSMB8P28062 276 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 ALDH3A1P30838 453 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 S100A7P31151 101 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 RPL28P46779 137 aaKnown RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 CSN1S1P47710 185 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 TPI1P60174 286 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 NAA20P61599 178 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 RELAQ04206 551 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 TPRXLQ17RH7 258 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 ZNF791Q3KP31 576 aaPredicted RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 COQ5Q5HYK3 327 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 C9orf64Q5T6V5 341 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 HIST2H3PS2Q5TEC6 136 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 LPCAT4Q643R3 524 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 CD200R1LQ6Q8B3 271 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 LYZL1Q6UWQ5 148 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 SSX8Q7RTT4 187 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 KTN1-AS1Q86SY8 53 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 C10orf67Q8IYJ2 551 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 SGMS2Q8NHU3 365 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 ACOT12Q8WYK0 555 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 ARL5BQ96KC2 179 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 ERMAPQ96PL5 475 aaPredicted RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 SPZ1Q9BXG8 430 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 PAQR5Q9NXK6 330 aaPredicted RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 AK3Q9UIJ7 227 aa1.26□□□□□ -2.21
PHC3-216ENST00000497171 LSM5Q9Y4Y9 91 aaKnown RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 RBM7Q9Y580 266 aaKnown RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 DICER1Q9UPY3 1922 aaKnown RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 NYNRINQ9P2P1 1898 aaKnown RBP1.26□□□□□ -2.21
PHC3-216ENST00000497171 ABCC12Q96J65 1359 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 IGHV3-64A0A075B6Q5 118 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 A0A0J9YW62 118 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 A0A1B0GW54 56 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 LST1O00453 97 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 PGLYRP1O75594 196 aaPredicted RBP1.25□□□□□ -2.21
PHC3-216ENST00000497171 NSA2O95478 260 aaKnown RBP1.25□□□□□ -2.21
PHC3-216ENST00000497171 PPBPP02775 128 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 TFPTP0C1Z6 253 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 ZNF705DP0CH99 300 aaPredicted RBP1.25□□□□□ -2.21
PHC3-216ENST00000497171 KCNE1P15382 129 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 IDH3GP51553 393 aaPredicted RBP1.25□□□□□ -2.21
PHC3-216ENST00000497171 EMP1P54849 157 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 EMX1Q04741 257 aaPredicted RBP1.25□□□□□ -2.21
PHC3-216ENST00000497171 TMEM155Q4W5P6 130 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 TNFAIP8L3Q5GJ75 292 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 C8orf74Q6P047 294 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 ZNF550Q7Z398 422 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 C10orf126Q8N4M7 172 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 RNF133Q8WVZ7 376 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 ASB17Q8WXJ9 295 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 SLC7A6Q92536 515 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 PTH2Q96A98 100 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 DOHHQ9BU89 302 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 VCX3BQ9H321 246 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 XPNPEP1Q9NQW7 623 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 ANGPT4Q9Y264 503 aa1.25□□□□□ -2.21
PHC3-216ENST00000497171 SIPA1L1O43166 1804 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 WDR90Q96KV7 1748 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 TRGV2A0A075B6R0 118 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 GGT3PA6NGU5 568 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 HMSDA8MTL9 139 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 H7C2G1 150 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 LEPROTO15243 131 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 NIPSNAP2O75323 286 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 DCTN3O75935 186 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 IFNA5P01569 189 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 LGALS1P09382 135 aaKnown RBP1.24□□□□□ -2.21
PHC3-216ENST00000497171 MSNP26038 577 aaKnown RBP1.24□□□□□ -2.21
PHC3-216ENST00000497171 MARCKSL1P49006 195 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 OR4D2P58180 307 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 RAB14P61106 215 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 MAGOHP61326 146 aaKnown RBP1.24□□□□□ -2.21
PHC3-216ENST00000497171 PTRHD1Q6GMV3 140 aaKnown RBP1.24□□□□□ -2.21
PHC3-216ENST00000497171 SLC36A1Q7Z2H8 476 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 ZNF676Q8N7Q3 588 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 CST9LQ9H4G1 147 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 C8orf4Q9NR00 106 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 GUCA1BQ9UMX6 200 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 TIMM22Q9Y584 194 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 SCN9AQ15858 1988 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 REREQ9P2R6 1566 aa1.24□□□□□ -2.21
PHC3-216ENST00000497171 RGS12O14924 1447 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 C9orf84Q5VXU9 1444 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 FLT4P35916 1363 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 ICE1Q9Y2F5 2266 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 TGIF2-C20orf24A0A0A6YYL0 155 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 A0A1B0GV50 99 aa1.23□□□□□ -2.21
PHC3-216ENST00000497171 SMIM23A6NLE4 172 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms