RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SMIM5Q71RC9 77 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 ANKRD37Q7Z713 158 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 C17orf64Q86WR6 236 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 HOGA1Q86XE5 327 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 EXOC3-AS1Q8N2X6 119 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 TOMM5Q8N4H5 51 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 ZNF615Q8N8J6 731 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 OR4F17Q8NGA8 305 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 VSTM2AQ8TAG5 236 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 RNF128Q8TEB7 428 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 NEUROG1Q92886 237 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 S100A16Q96FQ6 103 aaKnown RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 OR4F4Q96R69 305 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 CHST6Q9GZX3 395 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 PARLQ9H300 379 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 RNF186Q9NXI6 227 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 NUDT4Q9NZJ9 180 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 RARRES3Q9UL19 164 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 SCML2Q9UQR0 700 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 WASHC3Q9Y3C0 194 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 KLF12Q9Y4X4 402 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 SPCS1Q9Y6A9 102 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 ROBO1Q9Y6N7 1651 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 KDM3BQ7LBC6 1761 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 FRMPD3Q5JV73 1810 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 SLIT2O94813 1529 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 NUP210LQ5VU65 1888 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 A2ML1A8K2U0 1454 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 A0A1B0GV50 99 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 DPM2O94777 84 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 CLDN14O95500 239 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 WT1P19544 449 aaPredicted RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 RPS4Y1P22090 263 aaKnown RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 SFTPDP35247 375 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 VDAC2P45880 294 aaPredicted RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 GALR1P47211 349 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 ATP5G2Q06055 141 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 LTBQ06643 244 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 Q0VG73 95 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 C8orf82Q6P1X6 216 aaPredicted RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 Q6ZRG5 221 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 Q6ZWC4 215 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 MRPL55Q7Z7F7 128 aaKnown RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 TRPT1Q86TN4 253 aaKnown RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 LRTM2Q8N967 370 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 OR4C16Q8NGL9 310 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 OR10AG1Q8NH19 301 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 ATP6V0E2Q8NHE4 81 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 RITA1Q96K30 269 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 BMFQ96LC9 184 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 RARRES2Q99969 163 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 TBL1YQ9BQ87 522 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 RTBDNQ9BSG5 229 aaPredicted RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 ISG20L2Q9H9L3 353 aaKnown RBP2.54□□□□□ -2
SNRNP48-202ENST00000496946 COQ4Q9Y3A0 265 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 DOCK3Q8IZD9 2030 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 RLFQ13129 1914 aa2.54□□□□□ -2
SNRNP48-202ENST00000496946 NUP188Q5SRE5 1749 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 COL22A1Q8NFW1 1626 aaPredicted RBP2.53□□□□□ -2
SNRNP48-202ENST00000496946 PARP14Q460N5 1801 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 ARRDC5A6NEK1 342 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 DNAJC9-AS1A6NH13 148 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 ZNF732B4DXR9 585 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 TMEM262E9PQX1 116 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 SPINT2O43291 252 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 GSTZ1O43708 216 aaPredicted RBP2.53□□□□□ -2
SNRNP48-202ENST00000496946 NDUFB4O95168 129 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 IGHMP01871 453 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 H1F0P07305 194 aaKnown RBP2.53□□□□□ -2
SNRNP48-202ENST00000496946 MRPL3P09001 348 aaKnown RBP2.53□□□□□ -2
SNRNP48-202ENST00000496946 FABP2P12104 132 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 MYOD1P15172 320 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 LMO1P25800 156 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 CD38P28907 300 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 HERVK_113P63121 156 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 OR1C1Q15619 314 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 TRIP6Q15654 476 aaKnown RBP2.53□□□□□ -2
SNRNP48-202ENST00000496946 ZNF141Q15928 474 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 PMCHL1Q16048 86 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 MIDNQ504T8 468 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
SNRNP48-202ENST00000496946 PRSS41Q7RTY9 318 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 C10orf111Q8N326 155 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 ZIC4Q8N9L1 334 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 OR10J6PQ8NGY7 276 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 OR8S1Q8NH09 359 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 CMTM2Q8TAZ6 248 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 ZNF502Q8TBZ5 544 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 RASL10AQ92737 203 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 MAL2Q969L2 176 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 FRG2BQ96QU4 278 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 AGMATQ9BSE5 352 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 APOOQ9BUR5 198 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 WDR13Q9H1Z4 485 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 IL25Q9H293 177 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 CCDC88AQ3V6T2 1871 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 SCN11AQ9UI33 1791 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 NCKAP5O14513 1909 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 QSER1Q2KHR3 1735 aa2.53□□□□□ -2
SNRNP48-202ENST00000496946 LOC285095A0A1B0GVY8 99 aa2.53□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms