RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZNF581Q9P0T4 197 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 MMP24Q9Y5R2 645 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 SNRPGP15A8MWD9 76 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 PF4P02776 101 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 OR5AC1P0C628 307 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 BAK1Q16611 211 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 IAH1Q2TAA2 248 aaPredicted RBP6.97□□□□□ -1.29
U2AF1-212ENST00000496462 CCBE1Q6UXH8 406 aaPredicted RBP6.97□□□□□ -1.29
U2AF1-212ENST00000496462 ZNF818PQ6ZRF7 136 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 LYSMD2Q8IV50 215 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 ZNF709Q8N972 641 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 AJUBAQ96IF1 538 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 DUX5Q96PT3 197 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 ALX4Q9H161 411 aaPredicted RBP6.97□□□□□ -1.29
U2AF1-212ENST00000496462 ANAPC10Q9UM13 185 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 CHD3Q12873 2000 aaKnown RBP6.97□□□□□ -1.29
U2AF1-212ENST00000496462 NF1P21359 2839 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 A0A1B0GU03 582 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 CLDN34H7C241 214 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 SLC31A2O15432 143 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 OR8U8P0C7N1 319 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 IER3P46695 156 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 UBA52P62987 128 aaKnown RBP6.97□□□□□ -1.29
U2AF1-212ENST00000496462 TMEM219Q86XT9 240 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 OR5AN1Q8NGI8 311 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 TMEM140Q9NV12 185 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 OR51B2Q9Y5P1 312 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 STAB1Q9NY15 2570 aa6.97□□□□□ -1.29
U2AF1-212ENST00000496462 DNAJC9-AS1A6NH13 148 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 ST8SIA3O43173 380 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 RNASE1P07998 156 aaKnown RBP6.96□□□□□ -1.29
U2AF1-212ENST00000496462 HLA-GP17693 338 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 NPBWR1P48145 328 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 ZNF137PP52743 207 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 CRIP3Q6Q6R5 217 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 INO80EQ8NBZ0 244 aaPredicted RBP6.96□□□□□ -1.29
U2AF1-212ENST00000496462 PPP1R14BQ96C90 147 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 QTRT1Q9BXR0 403 aaKnown RBP6.96□□□□□ -1.29
U2AF1-212ENST00000496462 FXYD6Q9H0Q3 95 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 TMEM222Q9H0R3 208 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 SLA2Q9H6Q3 261 aa6.96□□□□□ -1.29
U2AF1-212ENST00000496462 FAM181BA6NEQ2 426 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 MARCH11A6NNE9 402 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 FAM90A9PA6NNJ1 464 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 DUS4LO95620 317 aaKnown RBP6.96□□□□□ -1.3
U2AF1-212ENST00000496462 PSG5Q15238 335 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 TEX38Q6PEX7 206 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 OR5M8Q8NGP6 311 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 LSM10Q969L4 123 aaKnown RBP6.96□□□□□ -1.3
U2AF1-212ENST00000496462 BET1LQ9NYM9 111 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 TCRBV4S1A1TA0A5B7 111 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 CDS2O95674 445 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 CT45A6P0DMU7 189 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 CT45A5P0DMU8 189 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 CT45A7P0DMV0 189 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 HSPE1P61604 102 aaKnown RBP6.96□□□□□ -1.3
U2AF1-212ENST00000496462 PAX2Q02962 417 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 SRSF8Q9BRL6 282 aaKnown RBP6.96□□□□□ -1.3
U2AF1-212ENST00000496462 OR51J1Q9H342 316 aa6.96□□□□□ -1.3
U2AF1-212ENST00000496462 CLPSL1A2RUU4 121 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 SPCS3P61009 180 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 HBG1P69891 147 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 HBG2P69892 147 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 ZNF79Q15937 498 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 SP6Q3SY56 376 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 ZNF439Q8NDP4 499 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 MRGPRFQ96AM1 343 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 KCNIP2Q9NS61 270 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 FOXA2Q9Y261 457 aaPredicted RBP6.95□□□□□ -1.3
U2AF1-212ENST00000496462 TRAV41A0A0B4J266 112 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 CRYM-AS1A6NIL9 109 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 CHST1O43916 411 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 PFDN1O60925 122 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 IFNA5P01569 189 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 G6PCP35575 357 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 EIF2B2P49770 351 aaKnown RBP6.95□□□□□ -1.3
U2AF1-212ENST00000496462 ASB13Q8WXK3 278 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 STRAPQ9Y3F4 350 aaKnown RBP6.95□□□□□ -1.3
U2AF1-212ENST00000496462 IGKV1D-8A0A087WSZ0 117 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 A0A096LNT2 108 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 SMCO3A2RU48 225 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 FAM90A26D6RGX4 464 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 FBXO24O75426 580 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 CD24P25063 80 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 LILRB2Q8N423 598 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 SCGB1C1Q8TD33 95 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 GALNT14Q96FL9 552 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 SOSTQ9BQB4 213 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 GNB4Q9HAV0 340 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 CACNG5Q9UF02 275 aa6.95□□□□□ -1.3
U2AF1-212ENST00000496462 LSM5Q9Y4Y9 91 aaKnown RBP6.95□□□□□ -1.3
U2AF1-212ENST00000496462 IGKV1D-13A0A0B4J2D9 117 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 OR13C7P0DN81 318 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 IGKV1-13P0DP09 117 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 UCP1P25874 307 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 CAV2P51636 162 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 ATP5G2Q06055 141 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 HERPUD1Q15011 391 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 ZNF562Q6V9R5 426 aa6.94□□□□□ -1.3
U2AF1-212ENST00000496462 TMEM167AQ8TBQ9 72 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms