RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 GPHA2Q96T91 129 aa13.16□□□□□ -0.3
COMMD3-214ENST00000496071 ZNF2Q9BSG1 426 aaPredicted RBP13.16□□□□□ -0.3
COMMD3-214ENST00000496071 ADAM30Q9UKF2 790 aa13.16□□□□□ -0.3
COMMD3-214ENST00000496071 TNCP24821 2201 aa13.16□□□□□ -0.3
COMMD3-214ENST00000496071 FAM25AB3EWG3 89 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 FAM25CB3EWG5 89 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 FAM25GB3EWG6 89 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 HPRT1P00492 218 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 GNRHRP30968 328 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 SLURP1P55000 103 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 SNX29P2Q8IUI4 249 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 LYSMD2Q8IV50 215 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 ADAD2Q8NCV1 583 aaKnown RBP13.15□□□□□ -0.3
COMMD3-214ENST00000496071 OR4A5Q8NH83 315 aa13.15□□□□□ -0.3
COMMD3-214ENST00000496071 TPPPO94811 219 aa13.14□□□□□ -0.31
COMMD3-214ENST00000496071 APELAP0DMC3 54 aa13.14□□□□□ -0.31
COMMD3-214ENST00000496071 ZP3P21754 424 aa13.14□□□□□ -0.31
COMMD3-214ENST00000496071 RCVRNP35243 200 aa13.14□□□□□ -0.31
COMMD3-214ENST00000496071 ECI1P42126 302 aa13.14□□□□□ -0.31
COMMD3-214ENST00000496071 TAS2R31P59538 309 aa13.14□□□□□ -0.31
COMMD3-214ENST00000496071 TTC9CQ8N5M4 171 aa13.14□□□□□ -0.31
COMMD3-214ENST00000496071 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
COMMD3-214ENST00000496071 PRKDCP78527 4128 aaKnown RBP13.14□□□□□ -0.31
COMMD3-214ENST00000496071 NQO2P16083 231 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 HLA-DMAP28067 261 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 HRH1P35367 487 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 RPL27AP46776 148 aaKnown RBP13.13□□□□□ -0.31
COMMD3-214ENST00000496071 TSPAN5P62079 268 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
COMMD3-214ENST00000496071 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 LPCAT3Q6P1A2 487 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 ZNF343Q6P1L6 599 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 SSX9Q7RTT3 188 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 CMTM1Q8IZ96 169 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 OR51H1Q8NH63 302 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 C15orf40Q8WUR7 153 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 PLEKHA2Q9HB19 425 aa13.13□□□□□ -0.31
COMMD3-214ENST00000496071 FAM223BA6NKX1 122 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 SAP30O75446 220 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 POU2AF1Q16633 256 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 C10orf55Q5SWW7 151 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 OR4A47Q6IF82 309 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 FAM223AQ8IWN6 122 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 ELOVL1Q9BW60 279 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 HRASLSQ9HDD0 168 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 PEF1Q9UBV8 284 aaKnown RBP13.12□□□□□ -0.31
COMMD3-214ENST00000496071 ZNF256Q9Y2P7 627 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-214ENST00000496071 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
COMMD3-214ENST00000496071 TRBV9A0A0B4J1U6 114 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 ANKRD34BA5PLL1 514 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 DPPA5A6NC42 116 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 GPR31O00270 319 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 PGLYRP1O75594 196 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-214ENST00000496071 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 F2RP25116 425 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 S100GP29377 79 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 RHOGP84095 191 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 FAM209BQ5JX69 171 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 RAB2BQ8WUD1 216 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 FYTTD1Q96QD9 318 aaKnown RBP13.11□□□□□ -0.31
COMMD3-214ENST00000496071 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 BCL7BQ9BQE9 202 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 SLC2A9Q9NRM0 540 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 COMMD9Q9P000 198 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 EXTL2Q9UBQ6 330 aa13.11□□□□□ -0.31
COMMD3-214ENST00000496071 HMX3A6NHT5 357 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 NPIPB5A8MRT5 1133 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 DHFRP00374 187 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 IL6RP08887 468 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-214ENST00000496071 FGF2P09038 288 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 HLA-GP17693 338 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 ATP5G2Q06055 141 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 CLVS1Q8IUQ0 354 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-214ENST00000496071 NECAP1Q8NC96 275 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 DMBX1Q8NFW5 382 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 OR6Q1Q8NGQ2 317 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 FXYD6Q9H0Q3 95 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 AKIP1Q9NQ31 210 aa13.1□□□□□ -0.31
COMMD3-214ENST00000496071 UPK2O00526 184 aa13.09□□□□□ -0.31
COMMD3-214ENST00000496071 RLN1P04808 185 aa13.09□□□□□ -0.31
COMMD3-214ENST00000496071 TMBIM6P55061 237 aa13.09□□□□□ -0.31
COMMD3-214ENST00000496071 UCP3P55916 312 aa13.09□□□□□ -0.31
COMMD3-214ENST00000496071 ERVK-16P61578 105 aa13.09□□□□□ -0.31
COMMD3-214ENST00000496071 KLF5Q13887 457 aaPredicted RBP13.09□□□□□ -0.31
COMMD3-214ENST00000496071 VAX1Q5SQQ9 334 aa13.09□□□□□ -0.31
COMMD3-214ENST00000496071 DGCR14Q96DF8 476 aaKnown RBP13.09□□□□□ -0.31
COMMD3-214ENST00000496071 PRR25Q96S07 402 aa13.09□□□□□ -0.31
COMMD3-214ENST00000496071 COMMD5Q9GZQ3 224 aa13.09□□□□□ -0.31
COMMD3-214ENST00000496071 E7EUB6 86 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 RGS5O15539 181 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 S1PR2O95136 353 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 PRH1P02810 166 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 IFNA6P05013 189 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 CRYGCP07315 174 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 RPL5P46777 297 aaKnown RBP13.08□□□□□ -0.32
COMMD3-214ENST00000496071 ZNF45Q02386 682 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms