RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 HIST1H1EP10412 219 aaKnown RBP2.26□□□□□ -2.05
SSR3-208ENST00000496050 IFI30P13284 250 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 PSMB8P28062 276 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 ALDH3A1P30838 453 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 RAP1GDS1P52306 607 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 CEBPGP53567 150 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 RPL26P61254 145 aaKnown RBP2.26□□□□□ -2.05
SSR3-208ENST00000496050 OR1M1Q8NGA1 313 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 SGMS2Q8NHU3 365 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 ROPN1LQ96C74 230 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 RPL26L1Q9UNX3 145 aaKnown RBP2.26□□□□□ -2.05
SSR3-208ENST00000496050 ANGPT4Q9Y264 503 aa2.26□□□□□ -2.05
SSR3-208ENST00000496050 NYNRINQ9P2P1 1898 aaKnown RBP2.26□□□□□ -2.05
SSR3-208ENST00000496050 WDR90Q96KV7 1748 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 TMEM269A0A1B0GVZ9 245 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 OVOL1O14753 267 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 PLA2G10O15496 165 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 IGKV1-16P04430 117 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 PEBP1P30086 187 aaKnown RBP2.25□□□□□ -2.05
SSR3-208ENST00000496050 RAB13P51153 203 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 TMEM258P61165 79 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 TNFAIP8L3Q5GJ75 292 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 FAM201AQ5SY85 155 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 SFXN4Q6P4A7 337 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 LYZL1Q6UWQ5 148 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 Q6ZTI0 123 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 SSX8Q7RTT4 187 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 DCXRQ7Z4W1 244 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 OR8J2Q8NGG1 315 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 OR51T1Q8NGJ9 327 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 PARD6GQ9BYG4 376 aaPredicted RBP2.25□□□□□ -2.05
SSR3-208ENST00000496050 V9GYY5 206 aaPredicted RBP2.25□□□□□ -2.05
SSR3-208ENST00000496050 DENND4BO75064 1496 aaPredicted RBP2.25□□□□□ -2.05
SSR3-208ENST00000496050 DCCP43146 1447 aa2.25□□□□□ -2.05
SSR3-208ENST00000496050 ZNF532Q9HCE3 1301 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 ICE1Q9Y2F5 2266 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 A0A0J9YW62 118 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 RFPL4AA6NLU0 287 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 RFPL4AL1F8VTS6 287 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 J3QKU1 62 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 CREBL2O60519 120 aaPredicted RBP2.24□□□□□ -2.05
SSR3-208ENST00000496050 OR5G3P0C626 314 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 KCNE1P15382 129 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 TPI1P60174 286 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 POLR2GP62487 172 aaKnown RBP eCLIP2.24□□□□□ -2.05
SSR3-208ENST00000496050 RPL30P62888 115 aaKnown RBP2.24□□□□□ -2.05
SSR3-208ENST00000496050 C8orf74Q6P047 294 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 OR51D1Q8NGF3 324 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 KLF6Q99612 283 aaPredicted RBP2.24□□□□□ -2.05
SSR3-208ENST00000496050 TIMM9Q9Y5J7 89 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 PXDNLA1KZ92 1463 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 SIPA1L1O43166 1804 aa2.24□□□□□ -2.05
SSR3-208ENST00000496050 VWDEQ8N2E2 1590 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 A8MUN3 132 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 IFNA16P05015 189 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 SULT1A1P50225 295 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 OR4D2P58180 307 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 SPCS3P61009 180 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 RELAQ04206 551 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 ITGB3BPQ13352 177 aaPredicted RBP2.23□□□□□ -2.05
SSR3-208ENST00000496050 OR2F1Q13607 317 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 HIST2H3PS2Q5TEC6 136 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 GLT8D1Q68CQ7 371 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 C1orf158Q8N1D5 194 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 SLC35B4Q969S0 331 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 IMP4Q96G21 291 aaKnown RBP2.23□□□□□ -2.05
SSR3-208ENST00000496050 CNBD2Q96M20 576 aa2.23□□□□□ -2.05
SSR3-208ENST00000496050 PLB1Q6P1J6 1458 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 IGHV3-64A0A075B6Q5 118 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 TMSB15BA0A087X1C1 80 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 GOLGA6L19H0YKK7 550 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 NSA2O95478 260 aaKnown RBP2.22□□□□□ -2.05
SSR3-208ENST00000496050 CCR2P41597 374 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 CSN1S1P47710 185 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 IDH3GP51553 393 aaPredicted RBP2.22□□□□□ -2.05
SSR3-208ENST00000496050 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 GLO1Q04760 184 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 RGS21Q2M5E4 152 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 C9orf64Q5T6V5 341 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 OR1L8Q8NGR8 309 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 IMMP2LQ96T52 175 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 TIMM21Q9BVV7 248 aa2.22□□□□□ -2.05
SSR3-208ENST00000496050 RSL24D1Q9UHA3 163 aaKnown RBP2.22□□□□□ -2.05
SSR3-208ENST00000496050 RBM7Q9Y580 266 aaKnown RBP2.22□□□□□ -2.05
SSR3-208ENST00000496050 SRP19P09132 144 aaKnown RBP2.21□□□□□ -2.06
SSR3-208ENST00000496050 LGALS1P09382 135 aaKnown RBP2.21□□□□□ -2.06
SSR3-208ENST00000496050 CD79AP11912 226 aa2.21□□□□□ -2.06
SSR3-208ENST00000496050 S100A7P31151 101 aa2.21□□□□□ -2.06
SSR3-208ENST00000496050 HIST1H4AP62805 103 aaKnown RBP2.21□□□□□ -2.06
SSR3-208ENST00000496050 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
SSR3-208ENST00000496050 TPRXLQ17RH7 258 aa2.21□□□□□ -2.06
SSR3-208ENST00000496050 ZNF705AQ6ZN79 300 aaPredicted RBP2.21□□□□□ -2.06
SSR3-208ENST00000496050 PPP1R14BQ96C90 147 aa2.21□□□□□ -2.06
SSR3-208ENST00000496050 CCDC42Q96M95 316 aa2.21□□□□□ -2.06
SSR3-208ENST00000496050 FLT4P35916 1363 aa2.21□□□□□ -2.06
SSR3-208ENST00000496050 COL5A3P25940 1745 aaPredicted RBP2.2□□□□□ -2.06
SSR3-208ENST00000496050 TRAV7A0A075B6U4 112 aa2.2□□□□□ -2.06
SSR3-208ENST00000496050 TRAV38-1A0A0B4J264 116 aa2.2□□□□□ -2.06
SSR3-208ENST00000496050 EEF1E1-BLOC1S5C9J1V9 151 aa2.2□□□□□ -2.06
SSR3-208ENST00000496050 INMT-MINDY4F8WBC2 141 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms