RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 COA6Q5JTJ3 125 aaKnown RBP10.78□□□□□ -0.68
PTPN7-217ENST00000495688 OR4A16Q8NH70 328 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 OR5R1Q8NH85 324 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 DIRC2Q96SL1 478 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 MGST2Q99735 147 aa10.78□□□□□ -0.68
PTPN7-217ENST00000495688 OPN3Q9H1Y3 402 aaPredicted RBP10.78□□□□□ -0.68
PTPN7-217ENST00000495688 IGHV2OR16-5A0A0B4J2B6 119 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 IGHV1-18A0A0C4DH31 117 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 SELLP14151 372 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 KITLGP21583 273 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 HTD2P86397 168 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 ZNF718Q3SXZ3 478 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 PLA2G2CQ5R387 149 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 FAM201AQ5SY85 155 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 TCTEX1D1Q8N7M0 179 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 SPOCK3Q9BQ16 436 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 A0A0U1RQK1 487 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 GFRA3O60609 400 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 ADH4P08319 380 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 TCF23Q7RTU1 214 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 RNASEH2CQ8TDP1 164 aaKnown RBP10.77□□□□□ -0.69
PTPN7-217ENST00000495688 C1orf159Q96HA4 380 aa10.77□□□□□ -0.69
PTPN7-217ENST00000495688 SCO2A0A1W2PP80 73 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 ZNF320A2RRD8 509 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 HPRT1P00492 218 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 IGHG3P01860 377 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 MYOD1P15172 320 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 VDAC2P45880 294 aaPredicted RBP10.76□□□□□ -0.69
PTPN7-217ENST00000495688 REC114Q7Z4M0 266 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 FAM90A1Q86YD7 464 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 GGTLC1Q9BX51 225 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 PXMP4Q9Y6I8 212 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 PRSS46E5RG02 174 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 PDE6DO43924 150 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 RNF224P0DH78 156 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 SRP14P37108 136 aaKnown RBP10.76□□□□□ -0.69
PTPN7-217ENST00000495688 PDLIM4P50479 330 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 LOXL3P58215 753 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 SPCS3P61009 180 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 RELBQ01201 579 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 PDLIM3Q53GG5 364 aaPredicted RBP10.76□□□□□ -0.69
PTPN7-217ENST00000495688 DNLZQ5SXM8 178 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 SPATA31B1PQ5VZV4 182 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 IFI27L2Q9H2X8 130 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 TMEM140Q9NV12 185 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 ARFGEF3Q5TH69 2177 aa10.76□□□□□ -0.69
PTPN7-217ENST00000495688 ZNF891A8MT65 544 aaPredicted RBP10.75□□□□□ -0.69
PTPN7-217ENST00000495688 TYMSP04818 313 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 SNRPCP09234 159 aaKnown RBP10.75□□□□□ -0.69
PTPN7-217ENST00000495688 THBS3P49746 956 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 KCNIP4Q6PIL6 250 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 CISD2Q8N5K1 135 aaKnown RBP10.75□□□□□ -0.69
PTPN7-217ENST00000495688 GCSAMQ8N6F7 178 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 SGMS2Q8NHU3 365 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 ACY3Q96HD9 319 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 SEPSECSQ9HD40 501 aaKnown RBP10.75□□□□□ -0.69
PTPN7-217ENST00000495688 NUPR1O60356 82 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 WT1P19544 449 aaPredicted RBP10.75□□□□□ -0.69
PTPN7-217ENST00000495688 RPL15P61313 204 aaKnown RBP10.75□□□□□ -0.69
PTPN7-217ENST00000495688 DUX4L9Q6RFH8 374 aaPredicted RBP10.75□□□□□ -0.69
PTPN7-217ENST00000495688 TMEM256Q8N2U0 113 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 KCNIP2Q9NS61 270 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 TACC2O95359 2948 aa10.75□□□□□ -0.69
PTPN7-217ENST00000495688 YLPM1P49750 1951 aaKnown RBP10.74□□□□□ -0.69
PTPN7-217ENST00000495688 A8MWP6 167 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 SRRM5B3KS81 715 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 TMPRSS2O15393 492 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 IGLV1-44P01699 117 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 OR4A8P0C604 315 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 CNN1P51911 297 aaKnown RBP10.74□□□□□ -0.69
PTPN7-217ENST00000495688 AARDQ4LEZ3 155 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 TMEM144Q7Z5S9 345 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 RAB1CQ92928 201 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 SFRP2Q96HF1 295 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 YTHDF2Q9Y5A9 579 aaKnown RBP10.74□□□□□ -0.69
PTPN7-217ENST00000495688 FOXH1O75593 365 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 STAG3L2P0CL84 134 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 STAG3L3P0CL85 134 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 PAX1P15863 534 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 OPRK1P41145 380 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 ARSJQ5FYB0 599 aaPredicted RBP10.74□□□□□ -0.69
PTPN7-217ENST00000495688 VHLLQ6RSH7 139 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 MRPL41Q8IXM3 137 aaKnown RBP10.74□□□□□ -0.69
PTPN7-217ENST00000495688 S1PR3Q99500 378 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 TCF19Q9Y242 345 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 TRAPPC1Q9Y5R8 145 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 GVINP1Q7Z2Y8 2422 aa10.74□□□□□ -0.69
PTPN7-217ENST00000495688 TNFSF13O75888 250 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 ERVK-16P61578 105 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 TRIP6Q15654 476 aaKnown RBP10.73□□□□□ -0.69
PTPN7-217ENST00000495688 SSX2Q16385 188 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 MBNL2Q5VZF2 373 aaKnown RBP10.73□□□□□ -0.69
PTPN7-217ENST00000495688 MOGAT3Q86VF5 341 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 DMRTC2Q8IXT2 367 aaPredicted RBP10.73□□□□□ -0.69
PTPN7-217ENST00000495688 OCC1Q8TAD7 63 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 MISP3Q96FF7 219 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 OR2V2Q96R30 315 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 JPT1Q9UK76 154 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 AKAP13Q12802 2813 aa10.73□□□□□ -0.69
PTPN7-217ENST00000495688 ZNF83P51522 516 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms