RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 RCC1LQ96I51 464 aaKnown RBP8.49□□□□□ -1.05
SAMM50-206ENST00000494795 HINT2Q9BX68 163 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 GNG13Q9P2W3 67 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 IGHV3-72A0A0B4J1Y9 119 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 TNFRSF13BO14836 293 aaPredicted RBP8.49□□□□□ -1.05
SAMM50-206ENST00000494795 BPIFB3P59826 476 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 OR4A47Q6IF82 309 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 CYB561D1Q8N8Q1 229 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 C1orf159Q96HA4 380 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 MRPL20Q9BYC9 149 aaKnown RBP8.49□□□□□ -1.05
SAMM50-206ENST00000494795 SLC25A22Q9H936 323 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 RPUSD1Q9UJJ7 312 aaKnown RBP8.49□□□□□ -1.05
SAMM50-206ENST00000494795 PUS1Q9Y606 427 aaKnown RBP eCLIP8.49□□□□□ -1.05
SAMM50-206ENST00000494795 WNK2Q9Y3S1 2297 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 RBFOX3A6NFN3 312 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 ZNF98A6NK75 572 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 UMAD1C9J7I0 102 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 NDUFS6O75380 124 aaKnown RBP8.48□□□□□ -1.05
SAMM50-206ENST00000494795 HPRT1P00492 218 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 RBPJQ06330 500 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 MSMO1Q15800 293 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 ZFP82Q8N141 532 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 STRAPQ9Y3F4 350 aaKnown RBP8.48□□□□□ -1.05
SAMM50-206ENST00000494795 ZNF727A8MUV8 499 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 LOXP28300 417 aaPredicted RBP8.48□□□□□ -1.05
SAMM50-206ENST00000494795 C11orf42Q8N5U0 333 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 CLDND2Q8NHS1 167 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 SCGB1C1Q8TD33 95 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 RPS10P5Q9NQ39 176 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 A0A1W2PPE2 198 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 FGF7P21781 194 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 KLRB1Q12918 225 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 TRAT1Q6PIZ9 186 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 OR10W1Q8NGF6 305 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 GNPNAT1Q96EK6 184 aaPredicted RBP8.48□□□□□ -1.05
SAMM50-206ENST00000494795 C12orf57Q99622 126 aa8.48□□□□□ -1.05
SAMM50-206ENST00000494795 IGHV1-69-2A0A0G2JMI3 117 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 M0R036 132 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 DFFBO76075 338 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 CD3EP07766 207 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 LGALS4P56470 323 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 SLC25A48Q6ZT89 311 aaKnown RBP8.47□□□□□ -1.05
SAMM50-206ENST00000494795 MUC15Q8N387 334 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 OR4A16Q8NH70 328 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 TRAV38-1A0A0B4J264 116 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 SMCO3A2RU48 225 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 NDUFS7O75251 213 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 IFNA10P01566 189 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 VDAC2P45880 294 aaPredicted RBP8.47□□□□□ -1.05
SAMM50-206ENST00000494795 RAB5CP51148 216 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 HFEQ30201 348 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 C10orf55Q5SWW7 151 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 C19orf35Q6ZS72 473 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 C2CD4CQ8TF44 421 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 SPG11Q96JI7 2443 aa8.47□□□□□ -1.05
SAMM50-206ENST00000494795 C7orf77A4D0Y5 90 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 NUDT19A8MXV4 375 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 SCAF4O95104 1147 aaKnown RBP8.46□□□□□ -1.05
SAMM50-206ENST00000494795 SNAPINO95295 136 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 IGHV3-48P01763 117 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 SRP19P09132 144 aaKnown RBP8.46□□□□□ -1.05
SAMM50-206ENST00000494795 APELAP0DMC3 54 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 NQO2P16083 231 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 APOBEC3AP31941 199 aaPredicted RBP8.46□□□□□ -1.05
SAMM50-206ENST00000494795 HBG1P69891 147 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 HBG2P69892 147 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 DHRS7BQ6IAN0 325 aaPredicted RBP8.46□□□□□ -1.05
SAMM50-206ENST00000494795 OR10P1Q8NGE3 313 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 ZNF714Q96N38 554 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 HEYLQ9NQ87 328 aaPredicted RBP8.46□□□□□ -1.05
SAMM50-206ENST00000494795 TCF19Q9Y242 345 aa8.46□□□□□ -1.05
SAMM50-206ENST00000494795 ZNF729A6NN14 1252 aaPredicted RBP8.46□□□□□ -1.06
SAMM50-206ENST00000494795 FAM90A26D6RGX4 464 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 SOD3P08294 240 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 CA5BP1Q8WTZ4 195 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 NPCDR1Q9BY65 106 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 SLC35B3Q9H1N7 401 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 PATZ1Q9HBE1 687 aaKnown RBP8.46□□□□□ -1.06
SAMM50-206ENST00000494795 LINC00312Q9Y6C7 94 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 hADV38S2A0JD32 116 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 CHRNB4P30926 498 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 PEA15Q15121 130 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 ZNF787Q6DD87 383 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 OR13D1Q8NGV5 346 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 SEBOXQ9HB31 216 aaPredicted RBP8.46□□□□□ -1.06
SAMM50-206ENST00000494795 PRELID3BQ9Y3B1 194 aa8.46□□□□□ -1.06
SAMM50-206ENST00000494795 COLCA2A8K830 154 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 PRSS46E5RG02 174 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 RUSC1-AS1Q66K80 236 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 ST6GALNAC3Q8NDV1 305 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 SSMEM1Q8WWF3 244 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 CORO2AQ92828 525 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 TMEM204Q9BSN7 226 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 EGLN1Q9GZT9 426 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 MS4A5Q9H3V2 200 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 CACNA1BQ00975 2339 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 A0A1W2PPH5 198 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 NKX6-3A6NJ46 265 aa8.45□□□□□ -1.06
SAMM50-206ENST00000494795 H7C2Y5 167 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms