RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 COX6B1P14854 86 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 NTF4P34130 210 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 RELBQ01201 579 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 ALG10Q5BKT4 473 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 LY6G6FQ5SQ64 297 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 SP5Q6BEB4 398 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-222ENST00000493919 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-222ENST00000493919 ZMYND19Q96E35 227 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-222ENST00000493919 EIF5A2Q9GZV4 153 aaKnown RBP9.74□□□□□ -0.85
BRCA1-222ENST00000493919 NPVFQ9HCQ7 196 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 ABRACLQ9P1F3 81 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 TRAV27A0A087WT01 109 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 TMEM272A0A1B0GTI8 110 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 OR2T8A6NH00 312 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF727A8MUV8 499 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 PLPP3O14495 311 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 ACTL6BO94805 426 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 CLRN1P58418 232 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 SMIM11AP58511 58 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 ANKRD16Q6P6B7 361 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 ZIC4Q8N9L1 334 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 TMEM116Q8NCL8 245 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 COQ2Q96H96 371 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 RAB40CQ96S21 281 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 UNC79Q9P2D8 2635 aa9.73□□□□□ -0.85
BRCA1-222ENST00000493919 C13orf42A0A1B0GVH6 325 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 MS4A18H0YCH9 400 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 K7EP34 96 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 TIMM8AO60220 97 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-222ENST00000493919 SLC16A7O60669 478 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 LYZL6O75951 148 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 MPZL1O95297 269 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 GPANK1O95872 356 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 PTH2RP49190 550 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 RPL18Q07020 188 aaKnown RBP9.72□□□□□ -0.85
BRCA1-222ENST00000493919 MS4A18Q3C1V0 323 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 TSPO2Q5TGU0 170 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 C12orf54Q6X4T0 127 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 Q6ZRG5 221 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 CXorf67Q86X51 503 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-222ENST00000493919 EMC6Q9BV81 110 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 FNDC4Q9H6D8 234 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-222ENST00000493919 PKDREJQ9NTG1 2253 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 A0A0G2JLM5 398 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 hADV38S2A0JD32 116 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 F5H5K5 113 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 M0R1X1 148 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 AKAIN1P0CW23 69 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 MMP9P14780 707 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 PYCR1P32322 319 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 ZFAND6Q6FIF0 208 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 SIGLEC15Q6ZMC9 328 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF66Q6ZN08 573 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 Q6ZT83 130 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF101Q8IZC7 436 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 TTC9CQ8N5M4 171 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 LINC01560Q8TB33 94 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 HSPB9Q9BQS6 159 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 SLC25A33Q9BSK2 321 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 SIRPDQ9H106 197 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 COA3Q9Y2R0 106 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-222ENST00000493919 TACC2O95359 2948 aa9.72□□□□□ -0.85
BRCA1-222ENST00000493919 NPIPB5A8MRT5 1133 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 C16orf97H3BN30 126 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 M0R2Z0 102 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 CDC42EP2O14613 210 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 HIST1H1CP16403 213 aaKnown RBP9.71□□□□□ -0.86
BRCA1-222ENST00000493919 IGFBP2P18065 325 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 FCGR2BP31994 310 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-222ENST00000493919 CNN1P51911 297 aaKnown RBP9.71□□□□□ -0.86
BRCA1-222ENST00000493919 GRB2P62993 217 aaKnown RBP9.71□□□□□ -0.86
BRCA1-222ENST00000493919 MZT1Q08AG7 82 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 KCNIP4Q6PIL6 250 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 STAC2Q6ZMT1 411 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 OR2G3Q8NGZ4 309 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 ABHD6Q9BV23 337 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 MS4A5Q9H3V2 200 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 ENY2Q9NPA8 101 aa9.71□□□□□ -0.86
BRCA1-222ENST00000493919 CHD3Q12873 2000 aaKnown RBP9.71□□□□□ -0.86
BRCA1-222ENST00000493919 CSMD2Q7Z408 3487 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 PF4P02776 101 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 IGHV1-2P23083 117 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 GLIPR1L1Q6UWM5 242 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 ZDHHC23Q8IYP9 409 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 OR51T1Q8NGJ9 327 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 OCC1Q8TAD7 63 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 NIPSNAP3BQ9BS92 247 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 WDR61Q9GZS3 305 aaKnown RBP9.7□□□□□ -0.86
BRCA1-222ENST00000493919 FBN2P35556 2912 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 LOC102725191A0A1B0GVB3 256 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 A6NDN8 102 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 F2RL2O00254 374 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 P2RY1P47900 373 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 TAS2R31P59538 309 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 RPS4XP62701 263 aaKnown RBP9.7□□□□□ -0.86
BRCA1-222ENST00000493919 ACTL10Q5JWF8 245 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 SLC18B1Q6NT16 456 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 C8orf86Q6ZUL3 223 aa9.7□□□□□ -0.86
BRCA1-222ENST00000493919 OR8G5Q8NG78 346 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms