RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 OR9G9P0C7N8 305 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 MAS1LP35410 378 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 RPL5P46777 297 aaKnown RBP17.47■□□□□ 0.39
SNIP1-203ENST00000493916 TAS2R31P59538 309 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 C10orf55Q5SWW7 151 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 AADACL3Q5VUY0 350 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 OR51H1Q8NH63 302 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 OR4A5Q8NH83 315 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 COA4Q9NYJ1 87 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 K7EIL1 84 aa17.46■□□□□ 0.39
SNIP1-203ENST00000493916 MPPED1O15442 326 aa17.46■□□□□ 0.39
SNIP1-203ENST00000493916 HPRT1P00492 218 aa17.46■□□□□ 0.39
SNIP1-203ENST00000493916 APELAP0DMC3 54 aa17.46■□□□□ 0.39
SNIP1-203ENST00000493916 POU2AF1Q16633 256 aa17.46■□□□□ 0.39
SNIP1-203ENST00000493916 C15orf40Q8WUR7 153 aa17.46■□□□□ 0.39
SNIP1-203ENST00000493916 DCUN1D4Q92564 292 aa17.46■□□□□ 0.39
SNIP1-203ENST00000493916 BET1LQ9NYM9 111 aa17.46■□□□□ 0.39
SNIP1-203ENST00000493916 CCDC59Q9P031 241 aaKnown RBP17.46■□□□□ 0.39
SNIP1-203ENST00000493916 SLURP1P55000 103 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 DGCR2P98153 550 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 VAX1Q5SQQ9 334 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 CMTM1Q8IZ96 169 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 USMG5Q96IX5 58 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 MIXL1Q9H2W2 232 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 PLEKHA2Q9HB19 425 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 COMMD9Q9P000 198 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 SCOCQ9UIL1 159 aa17.45■□□□□ 0.38
SNIP1-203ENST00000493916 WI2-2373I1.2A0A1W2PRP0 233 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 TEX22C9J3V5 150 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 GPR31O00270 319 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 OVOL1O14753 267 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 PGLYRP1O75594 196 aaPredicted RBP17.44■□□□□ 0.38
SNIP1-203ENST00000493916 RLN1P04808 185 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 NQO2P16083 231 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 INSL3P51460 131 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 TSPAN5P62079 268 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 OR4A47Q6IF82 309 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 SSX9Q7RTT3 188 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 TTC9CQ8N5M4 171 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 DYNC2LI1Q8TCX1 351 aa17.44■□□□□ 0.38
SNIP1-203ENST00000493916 DLX4Q92988 240 aaPredicted RBP17.44■□□□□ 0.38
SNIP1-203ENST00000493916 FGF2P09038 288 aa17.43■□□□□ 0.38
SNIP1-203ENST00000493916 ZNF735P0CB33 412 aa17.43■□□□□ 0.38
SNIP1-203ENST00000493916 RPL27AP46776 148 aaKnown RBP17.43■□□□□ 0.38
SNIP1-203ENST00000493916 RPL8P62917 257 aaKnown RBP17.43■□□□□ 0.38
SNIP1-203ENST00000493916 LPCAT3Q6P1A2 487 aa17.43■□□□□ 0.38
SNIP1-203ENST00000493916 SLC25A42Q86VD7 318 aa17.43■□□□□ 0.38
SNIP1-203ENST00000493916 LAX1Q8IWV1 398 aa17.43■□□□□ 0.38
SNIP1-203ENST00000493916 OR52I2Q8NH67 350 aa17.43■□□□□ 0.38
SNIP1-203ENST00000493916 ABHD1Q96SE0 405 aa17.43■□□□□ 0.38
SNIP1-203ENST00000493916 RANGRFQ9HD47 186 aaPredicted RBP17.43■□□□□ 0.38
SNIP1-203ENST00000493916 TNCP24821 2201 aa17.43■□□□□ 0.38
SNIP1-203ENST00000493916 RGS5O15539 181 aa17.42■□□□□ 0.38
SNIP1-203ENST00000493916 NOL3O60936 208 aaKnown RBP17.42■□□□□ 0.38
SNIP1-203ENST00000493916 S1PR2O95136 353 aa17.42■□□□□ 0.38
SNIP1-203ENST00000493916 IL6RP08887 468 aaPredicted RBP17.42■□□□□ 0.38
SNIP1-203ENST00000493916 HLA-GP17693 338 aa17.42■□□□□ 0.38
SNIP1-203ENST00000493916 F2RP25116 425 aa17.42■□□□□ 0.38
SNIP1-203ENST00000493916 KLK11Q9UBX7 282 aa17.42■□□□□ 0.38
SNIP1-203ENST00000493916 MTFP1Q9UDX5 166 aa17.42■□□□□ 0.38
SNIP1-203ENST00000493916 ZNF257Q9Y2Q1 563 aa17.42■□□□□ 0.38
SNIP1-203ENST00000493916 TRBV9A0A0B4J1U6 114 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 A0A1B0GW64 132 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 FAM223BA6NKX1 122 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 NPIPB5A8MRT5 1133 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 CTDSP2O14595 271 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 RBMXL2O75526 392 aaKnown RBP17.41■□□□□ 0.38
SNIP1-203ENST00000493916 TBPP20226 339 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 ZP3P21754 424 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 UCP3P55916 312 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 ZNF45Q02386 682 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 RNASE12Q5GAN4 147 aaKnown RBP17.41■□□□□ 0.38
SNIP1-203ENST00000493916 ZNF343Q6P1L6 599 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 ZNF429Q86V71 674 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 FAM223AQ8IWN6 122 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 DGCR14Q96DF8 476 aaKnown RBP17.41■□□□□ 0.38
SNIP1-203ENST00000493916 RSRP1Q9BUV0 290 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 HRASLSQ9HDD0 168 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 SLC2A9Q9NRM0 540 aa17.41■□□□□ 0.38
SNIP1-203ENST00000493916 HMX3A6NHT5 357 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 E7EUB6 86 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 H3BMQ9 156 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 M0QYG6 137 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 RHOGP84095 191 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 DEFA5Q01523 94 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 SLC38A6Q8IZM9 456 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 FCAMRQ8WWV6 532 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 ISOC1Q96CN7 298 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 TMEM140Q9NV12 185 aa17.4■□□□□ 0.38
SNIP1-203ENST00000493916 UPK2O00526 184 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 PRH1P02810 166 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 S100GP29377 79 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 MRPS10P82664 201 aaKnown RBP17.39■□□□□ 0.37
SNIP1-203ENST00000493916 RNASE10Q5GAN6 216 aaKnown RBP17.39■□□□□ 0.37
SNIP1-203ENST00000493916 ACSM6Q6P461 480 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 CADM3Q8N126 398 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 ARRDC1Q8N5I2 433 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 NECAP1Q8NC96 275 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 DMBX1Q8NFW5 382 aa17.39■□□□□ 0.37
SNIP1-203ENST00000493916 FYTTD1Q96QD9 318 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms