RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 CSTL1Q9H114 145 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 S4R3C0 116 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 HSPG2P98160 4391 aa10.45□□□□□ -0.74
PRPF40A-211ENST00000493468 IGLV11-55A0A075B6I3 123 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 PRSS29PA6NIE9 313 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 MPTX1A8MV57 137 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 IGLL5B9A064 214 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 BET1O15155 118 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 XRCC3O43542 346 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 CLEC3BP05452 202 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 IL6RP08887 468 aaPredicted RBP10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 CD3GP09693 182 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 MAS1LP35410 378 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 RPL27AP46776 148 aaKnown RBP10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 IGSF11Q5DX21 431 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 VSTM2AQ8TAG5 236 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 TMEM190Q8WZ59 177 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 ARHGAP5-AS1Q96IT6 56 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 C9orf16Q9BUW7 83 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 PECRQ9BY49 303 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 OR51E2Q9H255 320 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 HRH4Q9H3N8 390 aa10.44□□□□□ -0.74
PRPF40A-211ENST00000493468 EFCAB10A6NFE3 127 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 MFSD2BA6NFX1 497 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 CIB2O75838 187 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 KBTBD11O94819 623 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 CDK1P06493 297 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 ARFRP1Q13795 201 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 IRF3Q14653 427 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 SSX1Q16384 188 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 RBM48Q5RL73 367 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 CD300LFQ8TDQ1 290 aa10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 DAZ1Q9NQZ3 744 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 RBM7Q9Y580 266 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-211ENST00000493468 A0A1B0GW64 132 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 E7EUB6 86 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 RTL8CO15255 209 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 AREGP15514 252 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 ACSM3Q53FZ2 586 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 ZFP1Q6P2D0 407 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 PUSL1Q8N0Z8 303 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 OR5B3Q8NH48 314 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 TMEM167AQ8TBQ9 72 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 ZNF502Q8TBZ5 544 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 OR2A7Q96R45 310 aa10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 MRPS7Q9Y2R9 242 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-211ENST00000493468 FCGR3BO75015 233 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 FCGR3AP08637 254 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 GPR183P32249 361 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 WNT4P56705 351 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 INSL4Q14641 139 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 PLAC9Q5JTB6 97 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 PLET1Q6UQ28 207 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 H1FOOQ8IZA3 346 aaPredicted RBP10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 MS4A15Q8N5U1 240 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 ZNF555Q8NEP9 628 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 OR56B1Q8NGI3 324 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 CENPOQ9BU64 300 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 PRELID3BQ9Y3B1 194 aa10.41□□□□□ -0.74
PRPF40A-211ENST00000493468 SLC17A2O00624 439 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 ATP5HO75947 161 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 DEFA4P12838 97 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 CMC4P56277 68 aaPredicted RBP10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 MRPS15P82914 257 aaKnown RBP10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 ST3GAL4Q11206 333 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 P2RY14Q15391 338 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 KCTD9Q7L273 389 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 NR2C2APQ86WQ0 139 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 GINS4Q9BRT9 223 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 DCUN1D5Q9BTE7 237 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 PLA2G2EQ9NZK7 142 aa10.4□□□□□ -0.74
PRPF40A-211ENST00000493468 IGHV4-4A0A075B6R2 117 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 IGHV3-35A0A0C4DH35 117 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 ERICH4A6NGS2 130 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 MYL12BO14950 172 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 TGOLN2O43493 480 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 PTBP1P26599 531 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 PSMD7P51665 324 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 HSD17B12Q53GQ0 312 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 Q6ZS49 121 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 APRG1Q8IVJ8 170 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 VKORC1L1Q8N0U8 176 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 OR4S2Q8NH73 311 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 OR4A5Q8NH83 315 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 KCNK7Q9Y2U2 307 aa10.39□□□□□ -0.75
PRPF40A-211ENST00000493468 K7EMT4 169 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 NDUFA4O00483 81 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 CTSDP07339 412 aaPredicted RBP10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 UCHL1P09936 223 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 CD36P16671 472 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 PVRIGQ6DKI7 326 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 Q8NAQ8 132 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 VN1R17PQ8TDU5 208 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 ATP6V0BQ99437 205 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 RNF126Q9BV68 326 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 PLGRKTQ9HBL7 147 aa10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 SMPD3Q9NY59 655 aaPredicted RBP10.38□□□□□ -0.75
PRPF40A-211ENST00000493468 THYN1Q9P016 225 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms