RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 AIFM2Q9BRQ8 373 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 ZNF2Q9BSG1 426 aaPredicted RBP11.71□□□□□ -0.53
COL27A1-206ENST00000490831 RANGRFQ9HD47 186 aaPredicted RBP11.71□□□□□ -0.53
COL27A1-206ENST00000490831 BET1LQ9NYM9 111 aa11.71□□□□□ -0.53
COL27A1-206ENST00000490831 TEX22C9J3V5 150 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 RBMXL2O75526 392 aaKnown RBP11.7□□□□□ -0.54
COL27A1-206ENST00000490831 HPRT1P00492 218 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 IL6RP08887 468 aaPredicted RBP11.7□□□□□ -0.54
COL27A1-206ENST00000490831 FGF2P09038 288 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 RCVRNP35243 200 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 HRH1P35367 487 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 TAS2R31P59538 309 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 DCTN2Q13561 401 aaKnown RBP11.7□□□□□ -0.54
COL27A1-206ENST00000490831 C10orf55Q5SWW7 151 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 ACSM6Q6P461 480 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 OR4A5Q8NH83 315 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 PLEKHA2Q9HB19 425 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
COL27A1-206ENST00000490831 DNAH9Q9NYC9 4486 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 A0A1B0GW64 132 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 ZNF735P0CB33 412 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 APELAP0DMC3 54 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 HLA-DMAP28067 261 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 KLK9Q2XQG4 91 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 SNX29P2Q8IUI4 249 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 OR6F1Q8NGZ6 308 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 BCL7BQ9BQE9 202 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 FXYD6Q9H0Q3 95 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
COL27A1-206ENST00000490831 FAM223BA6NKX1 122 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 NPIPB5A8MRT5 1133 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 E7EUB6 86 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 MPPED1O15442 326 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 PGLYRP1O75594 196 aaPredicted RBP11.68□□□□□ -0.54
COL27A1-206ENST00000490831 NQO2P16083 231 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 ZP3P21754 424 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 RPL27AP46776 148 aaKnown RBP11.68□□□□□ -0.54
COL27A1-206ENST00000490831 RPL8P62917 257 aaKnown RBP11.68□□□□□ -0.54
COL27A1-206ENST00000490831 ZNF45Q02386 682 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 VAX1Q5SQQ9 334 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 AADACL3Q5VUY0 350 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 OR4A47Q6IF82 309 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 SLC25A42Q86VD7 318 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 FAM223AQ8IWN6 122 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 CADM3Q8N126 398 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 OR51H1Q8NH63 302 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 SLC2A9Q9NRM0 540 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 COMMD9Q9P000 198 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 ZNF257Q9Y2Q1 563 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
COL27A1-206ENST00000490831 SORL1Q92673 2214 aa11.68□□□□□ -0.54
COL27A1-206ENST00000490831 FAM25AB3EWG3 89 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 FAM25CB3EWG5 89 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 FAM25GB3EWG6 89 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 GPR31O00270 319 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 CRYGCP07315 174 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 HLA-GP17693 338 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 ECI1P42126 302 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 RHOGP84095 191 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 KLF5Q13887 457 aaPredicted RBP11.67□□□□□ -0.54
COL27A1-206ENST00000490831 SPCS2Q15005 226 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 DEFB121Q5J5C9 76 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 SSX9Q7RTT3 188 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 CMTM1Q8IZ96 169 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 RAB2BQ8WUD1 216 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 AKIP1Q9NQ31 210 aa11.67□□□□□ -0.54
COL27A1-206ENST00000490831 PEF1Q9UBV8 284 aaKnown RBP11.67□□□□□ -0.54
COL27A1-206ENST00000490831 ZNF256Q9Y2P7 627 aaPredicted RBP11.67□□□□□ -0.54
COL27A1-206ENST00000490831 HMX3A6NHT5 357 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 CGB1A6NKQ9 187 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 UPK2O00526 184 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 SAP30O75446 220 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 S1PR2O95136 353 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 RLN1P04808 185 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 F2RP25116 425 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 TMBIM6P55061 237 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 UCP3P55916 312 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 DEFA5Q01523 94 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 LPCAT3Q6P1A2 487 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 NECAP1Q8NC96 275 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 C15orf40Q8WUR7 153 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 DGCR14Q96DF8 476 aaKnown RBP11.66□□□□□ -0.54
COL27A1-206ENST00000490831 ABHD1Q96SE0 405 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 B9D2Q9BPU9 175 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 RSRP1Q9BUV0 290 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 MIXL1Q9H2W2 232 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 FAM212BQ9NTI7 297 aaPredicted RBP11.66□□□□□ -0.54
COL27A1-206ENST00000490831 EXTL2Q9UBQ6 330 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 MTFP1Q9UDX5 166 aa11.66□□□□□ -0.54
COL27A1-206ENST00000490831 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
COL27A1-206ENST00000490831 TRBV12-3P01733 135 aa11.65□□□□□ -0.54
COL27A1-206ENST00000490831 PRH1P02810 166 aa11.65□□□□□ -0.54
COL27A1-206ENST00000490831 CTRB1P17538 263 aa11.65□□□□□ -0.54
COL27A1-206ENST00000490831 RPL5P46777 297 aaKnown RBP11.65□□□□□ -0.54
COL27A1-206ENST00000490831 OR2B8PP59922 312 aa11.65□□□□□ -0.54
COL27A1-206ENST00000490831 TSPAN5P62079 268 aa11.65□□□□□ -0.54
COL27A1-206ENST00000490831 ZNF585BQ52M93 769 aa11.65□□□□□ -0.54
COL27A1-206ENST00000490831 FAM209BQ5JX69 171 aa11.65□□□□□ -0.54
COL27A1-206ENST00000490831 CTRB2Q6GPI1 263 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms