RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 ZNF251Q9BRH9 671 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 MAGT1Q9H0U3 335 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 A0A1W2PPH5 198 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 CLDN34H7C241 214 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 FCGR3BO75015 233 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 HPRT1P00492 218 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 KRASP01116 189 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 RNASE1P07998 156 aaKnown RBP12.66□□□□□ -0.38
PCCB-218ENST00000490504 ERVFRD-1P60508 538 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 RAB14P61106 215 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 VAMP2P63027 116 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 ALKAL2Q6UX46 152 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 LY6G5BQ8NDX9 201 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 C8orf46Q8TAG6 207 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 DDB2Q92466 427 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 LHX4Q969G2 390 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 PRDM13Q9H4Q3 707 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 CYTL1Q9NRR1 136 aa12.66□□□□□ -0.38
PCCB-218ENST00000490504 FAM90A26D6RGX4 464 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 HOXA3O43365 443 aaPredicted RBP12.65□□□□□ -0.38
PCCB-218ENST00000490504 TPT1P13693 172 aaKnown RBP12.65□□□□□ -0.38
PCCB-218ENST00000490504 BPIFB3P59826 476 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 LINC00311Q8N616 119 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 ZNF596Q8TC21 504 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 R3HDM4Q96D70 268 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 PHYHIPLQ96FC7 376 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 SESN1Q9Y6P5 492 aa12.65□□□□□ -0.38
PCCB-218ENST00000490504 A0A087X0M5 115 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 A0A1B0GX30 115 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 TOR1AO14656 332 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 CHST1O43916 411 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 NXPH3O95157 252 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 RBP4P02753 201 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 IGHV1-8P0DP01 117 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 ZNF833PQ6ZTB9 187 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 H2BFWTQ7Z2G1 175 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 PDZD9Q8IXQ8 264 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 OR2C3Q8N628 320 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 OR4S2Q8NH73 311 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 RAB40CQ96S21 281 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 LYRM2Q9NU23 88 aaPredicted RBP12.64□□□□□ -0.39
PCCB-218ENST00000490504 ONECUT1Q9UBC0 465 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 FBXL17Q9UF56 701 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 KPTNQ9Y664 436 aa12.64□□□□□ -0.39
PCCB-218ENST00000490504 IGHV1-69DA0A0B4J2H0 117 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 RPS10-NUDT3A0A1W2PQS6 291 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 MARCH11A6NNE9 402 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 IGHV1-69P01742 117 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 EIF5AP63241 154 aaKnown RBP12.63□□□□□ -0.39
PCCB-218ENST00000490504 PRB3Q04118 309 aaPredicted RBP12.63□□□□□ -0.39
PCCB-218ENST00000490504 MIDNQ504T8 468 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 VMO1Q7Z5L0 202 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 SLC25A31Q9H0C2 315 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 TMEM133Q9H2Q1 129 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 TNFRSF19Q9NS68 423 aa12.63□□□□□ -0.39
PCCB-218ENST00000490504 FAM90A9PA6NNJ1 464 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 J3QR06 171 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 SYNGR2O43760 224 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 GAPDHP04406 335 aaKnown RBP12.62□□□□□ -0.39
PCCB-218ENST00000490504 CAV2P51636 162 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 ERVK-16P61578 105 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCCB-218ENST00000490504 FOXL1Q12952 345 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 FAM71F2Q6NXP2 309 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 Q6YL49 198 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 BAP18Q8IXM2 172 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 C11orf42Q8N5U0 333 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 ZNF383Q8NA42 475 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 OR10X1Q8NGY0 326 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 OR9G1Q8NH87 305 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.62□□□□□ -0.39
PCCB-218ENST00000490504 ZNRD1Q9P1U0 126 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 FAM24AA6NFZ4 105 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 NQO2P16083 231 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 ARHGDIBP52566 201 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 DLX1P56177 255 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 RPL23AP62750 156 aaKnown RBP12.62□□□□□ -0.39
PCCB-218ENST00000490504 Q8N7P7 452 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 SIRT7Q9NRC8 400 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 HSPB7Q9UBY9 170 aa12.62□□□□□ -0.39
PCCB-218ENST00000490504 A0A0U1RQK1 487 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 hCG_1809904A0A1W2PP81 198 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 A0A1W2PPE2 198 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 A0A1W2PR64 198 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 A0A1W2PRV1 198 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 IGSF23A1L1A6 192 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 MED6O75586 246 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 JTBO76095 146 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 TMEM50AO95807 157 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 PAX9P55771 341 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 TNFRSF9Q07011 255 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 RPL7L1Q6DKI1 246 aaKnown RBP12.61□□□□□ -0.39
PCCB-218ENST00000490504 ABHD12Q8N2K0 398 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
PCCB-218ENST00000490504 TNFRSF14Q92956 283 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms