RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 GPHA2Q96T91 129 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 HRASLSQ9HDD0 168 aa13.42□□□□□ -0.26
SEC13-218ENST00000490283 LSM4Q9Y4Z0 139 aaKnown RBP13.42□□□□□ -0.26
SEC13-218ENST00000490283 SULT1C2O00338 296 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 DHFRP00374 187 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 PMP2P02689 132 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 EIF4EP06730 217 aaKnown RBP13.41□□□□□ -0.26
SEC13-218ENST00000490283 RPL8P62917 257 aaKnown RBP13.41□□□□□ -0.26
SEC13-218ENST00000490283 ATP5G2Q06055 141 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 DYRK1AQ13627 763 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 RPEL1Q2QD12 228 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 FAM209BQ5JX69 171 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 C10orf55Q5SWW7 151 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 MZT2AQ6P582 158 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 ANKRD13BQ86YJ7 626 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 TTC9CQ8N5M4 171 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 OR51H1Q8NH63 302 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 AP3S1Q92572 193 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 ZNF2Q9BSG1 426 aaPredicted RBP13.41□□□□□ -0.26
SEC13-218ENST00000490283 ZNF257Q9Y2Q1 563 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 SMAD5-AS1Q9Y6J3 95 aa13.41□□□□□ -0.26
SEC13-218ENST00000490283 HPRT1P00492 218 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 NHLRC4P0CG21 123 aaPredicted RBP13.4□□□□□ -0.26
SEC13-218ENST00000490283 NQO2P16083 231 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 SPNP16150 400 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 RFX2P48378 723 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 TAS2R31P59538 309 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 EXOSC2Q13868 293 aaKnown RBP13.4□□□□□ -0.26
SEC13-218ENST00000490283 DHRS11Q6UWP2 260 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 ZNF818PQ6ZRF7 136 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 CMTM1Q8IZ96 169 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 NECAP1Q8NC96 275 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 OR6F1Q8NGZ6 308 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 SCPEP1Q9HB40 452 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 AKIP1Q9NQ31 210 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 BET1LQ9NYM9 111 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 ANAPC10Q9UM13 185 aa13.4□□□□□ -0.26
SEC13-218ENST00000490283 FAM25AB3EWG3 89 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 FAM25CB3EWG5 89 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 FAM25GB3EWG6 89 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 PRH1P02810 166 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 GP9P14770 177 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 HLA-GP17693 338 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 NAT1P18440 290 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 S100GP29377 79 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 BRWD1-AS2P59051 145 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 ERVK-16P61578 105 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 KLF5Q13887 457 aaPredicted RBP13.39□□□□□ -0.27
SEC13-218ENST00000490283 OR4A47Q6IF82 309 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 C11orf87Q6NUJ2 197 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 OR9G4Q8NGQ1 327 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 MOB3AQ96BX8 217 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 SLC2A9Q9NRM0 540 aa13.39□□□□□ -0.27
SEC13-218ENST00000490283 TRBV9A0A0B4J1U6 114 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 HMX3A6NHT5 357 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 NPIPB5A8MRT5 1133 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 HLA-DMAP28067 261 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 GNRHRP30968 328 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 HRH1P35367 487 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 SYNJ2BPP57105 145 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 TSPAN5P62079 268 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 SNX29P2Q8IUI4 249 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 DMBX1Q8NFW5 382 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 MRPS26Q9BYN8 205 aaKnown RBP13.38□□□□□ -0.27
SEC13-218ENST00000490283 PLEKHA2Q9HB19 425 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 COMMD9Q9P000 198 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 PEMTQ9UBM1 199 aa13.38□□□□□ -0.27
SEC13-218ENST00000490283 TEX22C9J3V5 150 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 HPGDSO60760 199 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 OR2J3O76001 311 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 GABARAPO95166 117 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 RLN1P04808 185 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 ZNF735P0CB33 412 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 DEFA4P12838 97 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 RCVRNP35243 200 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 ZNF45Q02386 682 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 LPCAT3Q6P1A2 487 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 GPX8Q8TED1 209 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 COMMD5Q9GZQ3 224 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 ADAM30Q9UKF2 790 aa13.37□□□□□ -0.27
SEC13-218ENST00000490283 H0Y980 276 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 GPR31O00270 319 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 TRBV12-3P01733 135 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 IL6RP08887 468 aaPredicted RBP13.36□□□□□ -0.27
SEC13-218ENST00000490283 SMIM18P0DKX4 95 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 HIST1H1BP16401 226 aaKnown RBP13.36□□□□□ -0.27
SEC13-218ENST00000490283 ELK1P19419 428 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 PSMB6P28072 239 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 POU2AF1Q16633 256 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 GPR107Q5VW38 600 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 GPR141Q7Z602 305 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 TMEM140Q9NV12 185 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 FBXL7Q9UJT9 491 aa13.36□□□□□ -0.27
SEC13-218ENST00000490283 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.35□□□□□ -0.27
SEC13-218ENST00000490283 CYB5BO43169 146 aa13.35□□□□□ -0.27
SEC13-218ENST00000490283 RBMXL2O75526 392 aaKnown RBP13.35□□□□□ -0.27
SEC13-218ENST00000490283 PGLYRP1O75594 196 aaPredicted RBP13.35□□□□□ -0.27
SEC13-218ENST00000490283 S1PR2O95136 353 aa13.35□□□□□ -0.27
SEC13-218ENST00000490283 IGLV1-51P01701 117 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms