RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MT-CO2P00403 227 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 F8A1P23610 371 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 MSNP26038 577 aaKnown RBP0.72□□□□□ -2.29
CCDC39-206ENST00000489868 CCR7P32248 378 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 FXYD7P58549 80 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 VBP1P61758 197 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 B2MP61769 119 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 SKP1P63208 163 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 FABP5Q01469 135 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 C17orf78Q8N4C9 275 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 ATP6V1C2Q8NEY4 427 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 OR5AK3PQ8NH89 298 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 OPTNQ96CV9 577 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 SELENOSQ9BQE4 189 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 C9orf16Q9BUW7 83 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 HDHD2Q9H0R4 259 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 CENPHQ9H3R5 247 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 UCK1Q9HA47 277 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 FKBP14Q9NWM8 211 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 NKIRAS1Q9NYS0 192 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 TIMM9Q9Y5J7 89 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 ARFGEF3Q5TH69 2177 aa0.72□□□□□ -2.29
CCDC39-206ENST00000489868 ADCY9O60503 1353 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 C1orf232A0A0U1RR37 186 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 TRAPPC13A5PLN9 417 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 TMEM210A6NLX4 147 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 H7C2G1 150 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 CALUO43852 315 aaPredicted RBP0.71□□□□□ -2.3
CCDC39-206ENST00000489868 SCN2BO60939 215 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 NDUFS6O75380 124 aaKnown RBP0.71□□□□□ -2.3
CCDC39-206ENST00000489868 HLA-DRAP01903 254 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 IL9P15248 144 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 CD40LGP29965 261 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 HOXA6P31267 233 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 RAB14P61106 215 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 FADDQ13158 208 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 SLAMF1Q13291 335 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 RGS21Q2M5E4 152 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 CDKL4Q5MAI5 379 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 CLVS2Q5SYC1 327 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 CLEC6AQ6EIG7 209 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 DCXRQ7Z4W1 244 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 OR7G1Q8NGA0 311 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 OR8J2Q8NGG1 315 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 DRC3Q9H069 523 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 OR52A5Q9H2C5 316 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 MRPL40Q9NQ50 206 aaKnown RBP0.71□□□□□ -2.3
CCDC39-206ENST00000489868 C1orf109Q9NX04 203 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 PAQR5Q9NXK6 330 aaPredicted RBP0.71□□□□□ -2.3
CCDC39-206ENST00000489868 EURLQ9NYK6 297 aa0.71□□□□□ -2.3
CCDC39-206ENST00000489868 ROCK1Q13464 1354 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 TTC21AQ8NDW8 1320 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 IGKV2D-26A0A0A0MRZ7 120 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 A0A0A6YYH2 397 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 A0A0J9YW62 118 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 A6NJ64 397 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 GOLGA8KD6RF30 607 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 H3BQV1 296 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 PGRMC1O00264 195 aaKnown RBP0.7□□□□□ -2.3
CCDC39-206ENST00000489868 ITGB1BP1O14713 200 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 COCHO43405 550 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 AHSA1O95433 338 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 NSA2O95478 260 aaKnown RBP0.7□□□□□ -2.3
CCDC39-206ENST00000489868 HLA-DQB2P05538 268 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 TFPTP0C1Z6 253 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 CCL5P13501 91 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 PSMB6P28072 239 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 CD79BP40259 229 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 CDC34P49427 236 aaPredicted RBP0.7□□□□□ -2.3
CCDC39-206ENST00000489868 CEBPGP53567 150 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 TAS2R20P59543 309 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 UBE2G2P60604 165 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 POLR2GP62487 172 aaKnown RBP eCLIP0.7□□□□□ -2.3
CCDC39-206ENST00000489868 REEP5Q00765 189 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 STX5Q13190 355 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 PMS2P3Q13401 168 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 LRRC75BQ2VPJ9 315 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 HLA-DRB5Q30154 266 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 DNAL1Q4LDG9 190 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 AKAP14Q86UN6 197 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 C12orf43Q96C57 262 aaKnown RBP0.7□□□□□ -2.3
CCDC39-206ENST00000489868 TMA16Q96EY4 203 aaKnown RBP0.7□□□□□ -2.3
CCDC39-206ENST00000489868 RBP7Q96R05 134 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 C7orf50Q9BRJ6 194 aaKnown RBP0.7□□□□□ -2.3
CCDC39-206ENST00000489868 MED10Q9BTT4 135 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 TMEM109Q9BVC6 243 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 PARD6GQ9BYG4 376 aaPredicted RBP0.7□□□□□ -2.3
CCDC39-206ENST00000489868 OR51V1Q9H2C8 321 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 C3orf18Q9UK00 162 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 TIMM22Q9Y584 194 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 ANKRD30AQ9BXX3 1397 aa0.7□□□□□ -2.3
CCDC39-206ENST00000489868 SCAF11Q99590 1463 aaKnown RBP0.69□□□□□ -2.3
CCDC39-206ENST00000489868 TRAV38-1A0A0B4J264 116 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 LOC105371267A0A1B0GV96 52 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 FABP12A6NFH5 140 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 SMIM23A6NLE4 172 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 LRRN3E7EW58 273 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 H0YJX3 145 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 HCRTO43612 131 aa0.69□□□□□ -2.3
CCDC39-206ENST00000489868 ORC5O43913 435 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms