RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SSTR5P35346 364 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 KIR2DL1P43626 348 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 KIR2DL2P43627 348 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 ATP5G3P48201 142 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 GRB2P62993 217 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 PMP22Q01453 160 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 TGFBR3Q03167 851 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 FUT7Q11130 342 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 KIR2DS3Q14952 304 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 LTC4SQ16873 150 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 HNRNPA1L2Q32P51 320 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 PLCXD3Q63HM9 321 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 RASL11AQ6T310 242 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM14EPQ6UXP3 125 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 FOXI2Q6ZQN5 318 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF788Q6ZQV5 615 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 C16orf52Q8NHV5 167 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 ST6GALNAC6Q969X2 333 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 RERGQ96A58 199 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM147Q9BVK8 224 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 TMEM191AQ9H0A3 160 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 OBP2BQ9NPH6 170 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 THYN1Q9P016 225 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF835Q9Y2P0 537 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 V9GYV3 84 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 TDRD6O60522 2096 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 A0A087X0K7 114 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 TRGV10A0A0A0MS01 117 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 A0A0G2JRQ6 117 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 PRR19A6NJB7 356 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 FAM90A26D6RGX4 464 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 H0Y8G0 127 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 H0YGG7 62 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 H3BMH7 237 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 SYS1-DBNDD2H3BUS1 97 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 H3BUT2 72 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 K7EN84 100 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 HRKO00198 91 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 RBMXL2O75526 392 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 RHBDL1O75783 438 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 IGHG1P01857 330 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 IAPPP10997 89 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 USF1P22415 310 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 HTR1DP28221 377 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 CYB561P49447 251 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 METAP1P53582 386 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 RPS16P62249 146 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 IGLV3-21P80748 117 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 CD69Q07108 199 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 PSG7Q13046 419 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 GABRA6Q16445 453 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 NNATQ16517 81 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 SPANXN5Q5MJ07 72 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 SLC25A47Q6Q0C1 308 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 Q6ZRM9 215 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 H1FNTQ75WM6 255 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 PRSS41Q7RTY9 318 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 WIPF2Q8TF74 440 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 PNRC2Q9NPJ4 139 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 OSTCQ9NRP0 149 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 FGF21Q9NSA1 209 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 STARD5Q9NSY2 213 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 MRPL16Q9NX20 251 aaKnown RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 COPS7AQ9UBW8 275 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 JPT1Q9UK76 154 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF257Q9Y2Q1 563 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 TSSC4Q9Y5U2 329 aaPredicted RBP3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 LRRK1Q38SD2 2015 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 BDP1A6H8Y1 2624 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 SCN10AQ9Y5Y9 1956 aa3.99□□□□□ -1.77
SNRNP40-206ENST00000489853 MYOFQ9NZM1 2061 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 OBSL1O75147 1896 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 CCL15-CCL14A0A0B4J2E2 113 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 TEX48A0A1B0GUV7 120 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 A0A1W2PPC4 97 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 A0A1W2PPM0 123 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 IZUMO1RA6ND01 250 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 PDCD6O75340 191 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 DHRS3O75911 302 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 EML2O95834 649 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 COX8AP10176 69 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 HIST1H1EP10412 219 aaKnown RBP3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 FABP2P12104 132 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 CCL5P13501 91 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 CD38P28907 300 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 PPOXP50336 477 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 SSBP2P81877 361 aaPredicted RBP3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 CCL15Q16663 113 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 ZNF841Q6ZN19 808 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 BPIFA4PQ86YQ2 179 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 OSR2Q8N2R0 312 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 OR1F12Q8NHA8 337 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 FLVCR1-AS1Q8TAF5 88 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 CT55Q8WUE5 264 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 ELSPBP1Q96BH3 223 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 PERPQ96FX8 193 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 LYZL4Q96KX0 146 aa3.98□□□□□ -1.77
SNRNP40-206ENST00000489853 DGAT2Q96PD7 388 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms