RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 DYSFO75923 2080 aa12.32□□□□□ -0.44
COL9A1-208ENST00000489611 TMEM8BA6NDV4 472 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 OPRK1P41145 380 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
COL9A1-208ENST00000489611 HSPE1P61604 102 aaKnown RBP12.31□□□□□ -0.44
COL9A1-208ENST00000489611 C22orf34Q6ZV56 151 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 SSX7Q7RTT5 188 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 CCL13Q99616 98 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 SDF2L1Q9HCN8 221 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 ENY2Q9NPA8 101 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 FKBP11Q9NYL4 201 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 TCF19Q9Y242 345 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 DIDO1Q9BTC0 2240 aaKnown RBP12.31□□□□□ -0.44
COL9A1-208ENST00000489611 MAP1BP46821 2468 aaKnown RBP12.31□□□□□ -0.44
COL9A1-208ENST00000489611 CADP27708 2225 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 DSPP15924 2871 aaKnown RBP12.31□□□□□ -0.44
COL9A1-208ENST00000489611 DPRXA6NFQ7 191 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 C5orf52A6NGY3 159 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 IGKV1D-33P01593 117 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 IGKV1-33P01594 117 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 GYPAP02724 150 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 S100A8P05109 93 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 FBP1P09467 338 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 LINC00205P59089 165 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 BSPH1Q075Z2 132 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 LYG1Q8N1E2 194 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 TCEAL7Q9BRU2 100 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 NAT8Q9UHE5 227 aa12.31□□□□□ -0.44
COL9A1-208ENST00000489611 ZNF727A8MUV8 499 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 CLDN34H7C241 214 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 UBE2CO00762 179 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 CDC34P49427 236 aaPredicted RBP12.3□□□□□ -0.44
COL9A1-208ENST00000489611 TFF3Q07654 80 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 FAM201AQ5SY85 155 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 ADAM5Q6NVV9 412 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 CYP2G1PQ6ZSU1 146 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 C8orf31Q8N9H6 132 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 OR13D1Q8NGV5 346 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 C2CD4CQ8TF44 421 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 RAB24Q969Q5 203 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 PLPPR2Q96GM1 343 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 SAP30LQ9HAJ7 183 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 NPVFQ9HCQ7 196 aa12.3□□□□□ -0.44
COL9A1-208ENST00000489611 METTL1Q9UBP6 276 aaKnown RBP12.3□□□□□ -0.44
COL9A1-208ENST00000489611 TMPRSS2O15393 492 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 SLC31A2O15432 143 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 AKR1D1P51857 326 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 RAB31Q13636 194 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 OR4A47Q6IF82 309 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 FAM71F2Q6NXP2 309 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 TCF23Q7RTU1 214 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 ZFP82Q8N141 532 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 FAM216BQ8N7L0 139 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 DEFB108BQ8NET1 73 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 RND1Q92730 232 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 VKORC1Q9BQB6 163 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 MS4A5Q9H3V2 200 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 SLC25A10Q9UBX3 287 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-208ENST00000489611 RAI1Q7Z5J4 1906 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-208ENST00000489611 TLN1Q9Y490 2541 aaKnown RBP12.29□□□□□ -0.44
COL9A1-208ENST00000489611 PPIAL4EA0A075B759 164 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 PPIAL4DF5H284 164 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 KBTBD11O94819 623 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 THBDP07204 575 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 PPIAL4FP0DN26 164 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 SELLP14151 372 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 RND2P52198 227 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 CCL8P80075 99 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 ELOBQ15370 118 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 WDR25Q64LD2 544 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-208ENST00000489611 ZNF383Q8NA42 475 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 NEIL1Q96FI4 390 aaPredicted RBP12.29□□□□□ -0.44
COL9A1-208ENST00000489611 SLC25A22Q9H936 323 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 PPIAL4AQ9Y536 164 aa12.29□□□□□ -0.44
COL9A1-208ENST00000489611 hCG_1809904A0A1W2PP81 198 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 A0A1W2PPV4 95 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 A0A1W2PR64 198 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 A0A1W2PRV1 198 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 TMEM178BH3BS89 294 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 PDE6DO43924 150 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 OPN1MWP04001 364 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 OPN1MW2P0DN77 364 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 OPN1MW3P0DN78 364 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 NDUFB7P17568 137 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 CD81P60033 236 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 RPL31P62899 125 aaKnown RBP12.28□□□□□ -0.44
COL9A1-208ENST00000489611 TLE1Q04724 770 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 TMEM241Q24JQ0 296 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 OSR1Q8TAX0 266 aaPredicted RBP12.28□□□□□ -0.44
COL9A1-208ENST00000489611 SMIM7Q9BQ49 75 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 DOCK11Q5JSL3 2073 aa12.28□□□□□ -0.44
COL9A1-208ENST00000489611 VENTXO95231 258 aa12.27□□□□□ -0.44
COL9A1-208ENST00000489611 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.44
COL9A1-208ENST00000489611 NPY1RP25929 384 aa12.27□□□□□ -0.44
COL9A1-208ENST00000489611 SPINK9Q5DT21 86 aa12.27□□□□□ -0.44
COL9A1-208ENST00000489611 TREML4Q6UXN2 200 aa12.27□□□□□ -0.44
COL9A1-208ENST00000489611 ZNF833PQ6ZTB9 187 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms