RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 TMEM229BQ8NBD8 167 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 CD300LFQ8TDQ1 290 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 SRSF12Q8WXF0 261 aaKnown RBP12.24□□□□□ -0.45
LMX1A-204ENST00000489443 AIFM2Q9BRQ8 373 aa12.24□□□□□ -0.45
LMX1A-204ENST00000489443 NXF2Q9GZY0 626 aaKnown RBP12.24□□□□□ -0.45
LMX1A-204ENST00000489443 RBM38Q9H0Z9 239 aaKnown RBP12.24□□□□□ -0.45
LMX1A-204ENST00000489443 IGHV3-11P01762 117 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 TBPP20226 339 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 F2RP25116 425 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 S100GP29377 79 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 BEAN1Q3B7T3 259 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 ASPHD1Q5U4P2 390 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 OR11H1Q8NG94 326 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 TMEM167AQ8TBQ9 72 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 SMIM4Q8WVI0 70 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 DGCR14Q96DF8 476 aaKnown RBP12.23□□□□□ -0.45
LMX1A-204ENST00000489443 RCC1LQ96I51 464 aaKnown RBP12.23□□□□□ -0.45
LMX1A-204ENST00000489443 TMEM68Q96MH6 324 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 SLA2Q9H6Q3 261 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 HRASLSQ9HDD0 168 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 COA4Q9NYJ1 87 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 RABL2AQ9UBK7 228 aaPredicted RBP12.23□□□□□ -0.45
LMX1A-204ENST00000489443 RABL2BQ9UNT1 228 aa12.23□□□□□ -0.45
LMX1A-204ENST00000489443 FABP12A6NFH5 140 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 I3L521 148 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 S1PR2O95136 353 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 RAB3DO95716 219 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 PGAM2P15259 253 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 RPA2P15927 270 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 NQO2P16083 231 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 LPAR6P43657 344 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 UCP3P55916 312 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 TAS2R31P59538 309 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 TAS2R19P59542 299 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 RUNX1Q01196 453 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 SSBP1Q04837 148 aaKnown RBP12.22□□□□□ -0.45
LMX1A-204ENST00000489443 OR4A47Q6IF82 309 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 STEAP1BQ6NZ63 245 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 SLC38A6Q8IZM9 456 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 DMBX1Q8NFW5 382 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 OR4D10Q8NGI6 311 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 OR1N2Q8NGR9 330 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 SPIN2AQ99865 258 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 SPIN2BQ9BPZ2 258 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 ALX4Q9H161 411 aaPredicted RBP12.22□□□□□ -0.45
LMX1A-204ENST00000489443 PLEKHA2Q9HB19 425 aa12.22□□□□□ -0.45
LMX1A-204ENST00000489443 CTDSPLO15194 276 aa12.21□□□□□ -0.45
LMX1A-204ENST00000489443 PRB2P02812 416 aaPredicted RBP12.21□□□□□ -0.45
LMX1A-204ENST00000489443 CD74P04233 296 aa12.21□□□□□ -0.45
LMX1A-204ENST00000489443 RPL27AP46776 148 aaKnown RBP12.21□□□□□ -0.45
LMX1A-204ENST00000489443 RPL8P62917 257 aaKnown RBP12.21□□□□□ -0.45
LMX1A-204ENST00000489443 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.45
LMX1A-204ENST00000489443 ARRDC1Q8N5I2 433 aa12.21□□□□□ -0.45
LMX1A-204ENST00000489443 DPF1Q92782 380 aa12.21□□□□□ -0.45
LMX1A-204ENST00000489443 FYTTD1Q96QD9 318 aaKnown RBP12.21□□□□□ -0.45
LMX1A-204ENST00000489443 BET1LQ9NYM9 111 aa12.21□□□□□ -0.45
LMX1A-204ENST00000489443 C13orf42A0A1B0GVH6 325 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 HMX3A6NHT5 357 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 H3BUA1 57 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 ZNF701M0R085 212 aaPredicted RBP12.2□□□□□ -0.46
LMX1A-204ENST00000489443 LGALS1P09382 135 aaKnown RBP12.2□□□□□ -0.46
LMX1A-204ENST00000489443 OR9G9P0C7N8 305 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 MYOD1P15172 320 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 HLA-GP17693 338 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 PI3P19957 117 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 MAS1LP35410 378 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 PPP5CP53041 499 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 ERVK-16P61578 105 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 ZNF616Q08AN1 781 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 KPRPQ5T749 579 aaPredicted RBP12.2□□□□□ -0.46
LMX1A-204ENST00000489443 FAAP20Q6NZ36 180 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 TBC1D26Q86UD7 250 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 LHFPL1Q86WI0 220 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 OR4A5Q8NH83 315 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 COMMD9Q9P000 198 aa12.2□□□□□ -0.46
LMX1A-204ENST00000489443 TRAV3A0A0B4J244 114 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 DPPA5A6NC42 116 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 UPK2O00526 184 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 DUS4LO95620 317 aaKnown RBP12.19□□□□□ -0.46
LMX1A-204ENST00000489443 KRASP01116 189 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 IL6RP08887 468 aaPredicted RBP12.19□□□□□ -0.46
LMX1A-204ENST00000489443 OR8U8P0C7N1 319 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 S100A5P33763 92 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 DEFA5Q01523 94 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 FHL3Q13643 280 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 MEF2DQ14814 521 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 POU2AF1Q16633 256 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 ZNF585BQ52M93 769 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 FOXB2Q5VYV0 432 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 ADAD2Q8NCV1 583 aaKnown RBP12.19□□□□□ -0.46
LMX1A-204ENST00000489443 TERB2Q8NHR7 220 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 SOSTQ9BQB4 213 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 MCRIP2Q9BUT9 160 aaKnown RBP12.19□□□□□ -0.46
LMX1A-204ENST00000489443 SLC2A9Q9NRM0 540 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 TMEM140Q9NV12 185 aa12.19□□□□□ -0.46
LMX1A-204ENST00000489443 A0A0G2JLM5 398 aa12.18□□□□□ -0.46
LMX1A-204ENST00000489443 MARCH11A6NNE9 402 aa12.18□□□□□ -0.46
LMX1A-204ENST00000489443 TEX22C9J3V5 150 aa12.18□□□□□ -0.46
LMX1A-204ENST00000489443 E7EUB6 86 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms