RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 RAMP3O60896 148 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 KBTBD11O94819 623 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 HPRT1P00492 218 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 IGHV3-11P01762 117 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 RLN1P04808 185 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 BRWD1-AS2P59051 145 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 RUNX1Q01196 453 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 REC114Q7Z4M0 266 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 OR52I2Q8NH67 350 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 ISOC1Q96CN7 298 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 DIRAS2Q96HU8 199 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 ABHD1Q96SE0 405 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 MIXL1Q9H2W2 232 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 HRASLSQ9HDD0 168 aa10.39□□□□□ -0.75
CCL28-202ENST00000489442 A0A0G2JLM5 398 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 DPPA5A6NC42 116 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 M0QYG6 137 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 PGLYRP1O75594 196 aaPredicted RBP10.38□□□□□ -0.75
CCL28-202ENST00000489442 LGALS1P09382 135 aaKnown RBP10.38□□□□□ -0.75
CCL28-202ENST00000489442 NQO2P16083 231 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 IL18Q14116 193 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 MRGPRG-AS1Q2M3A8 158 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 RNASE10Q5GAN6 216 aaKnown RBP10.38□□□□□ -0.75
CCL28-202ENST00000489442 DMBX1Q8NFW5 382 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 TMEM167AQ8TBQ9 72 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 ALX4Q9H161 411 aaPredicted RBP10.38□□□□□ -0.75
CCL28-202ENST00000489442 MTFP1Q9UDX5 166 aa10.38□□□□□ -0.75
CCL28-202ENST00000489442 LINC01619G3V211 115 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 OR9G9P0C7N8 305 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 HOXD3P31249 432 aaPredicted RBP10.37□□□□□ -0.75
CCL28-202ENST00000489442 MAS1LP35410 378 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 RPL27AP46776 148 aaKnown RBP10.37□□□□□ -0.75
CCL28-202ENST00000489442 TAS2R31P59538 309 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 ERVK-16P61578 105 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 RPL8P62917 257 aaKnown RBP10.37□□□□□ -0.75
CCL28-202ENST00000489442 MRPS10P82664 201 aaKnown RBP10.37□□□□□ -0.75
CCL28-202ENST00000489442 FHL3Q13643 280 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 PHLDA2Q53GA4 152 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 VAX1Q5SQQ9 334 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 ASPHD1Q5U4P2 390 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 SLC25A42Q86VD7 318 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 PUSL1Q8N0Z8 303 aaKnown RBP10.37□□□□□ -0.75
CCL28-202ENST00000489442 FYTTD1Q96QD9 318 aaKnown RBP10.37□□□□□ -0.75
CCL28-202ENST00000489442 FXYD6Q9H0Q3 95 aa10.37□□□□□ -0.75
CCL28-202ENST00000489442 ZMAT5Q9UDW3 170 aaKnown RBP10.37□□□□□ -0.75
CCL28-202ENST00000489442 SEC14L6B5MCN3 397 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 GABARAPH6UMI1 98 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 CD3DP04234 171 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 HSPB1P04792 205 aaKnown RBP10.36□□□□□ -0.75
CCL28-202ENST00000489442 PGAM2P15259 253 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 TBPP20226 339 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 F2RP25116 425 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 TAS2R19P59542 299 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 C10orf55Q5SWW7 151 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 C9orf66Q5T8R8 295 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 OR4A47Q6IF82 309 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 SLC38A6Q8IZM9 456 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 OR4A5Q8NH83 315 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 MCFD2Q8NI22 146 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 DGCR14Q96DF8 476 aaKnown RBP10.36□□□□□ -0.75
CCL28-202ENST00000489442 TINAGL1Q9GZM7 467 aaPredicted RBP10.36□□□□□ -0.75
CCL28-202ENST00000489442 PLEKHA2Q9HB19 425 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 BET1LQ9NYM9 111 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 COMMD9Q9P000 198 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 RABL2AQ9UBK7 228 aaPredicted RBP10.36□□□□□ -0.75
CCL28-202ENST00000489442 RABL2BQ9UNT1 228 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 CEPT1Q9Y6K0 416 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 SORL1Q92673 2214 aa10.36□□□□□ -0.75
CCL28-202ENST00000489442 PRKDCP78527 4128 aaKnown RBP10.36□□□□□ -0.75
CCL28-202ENST00000489442 IGHV4OR15-8A0A075B7B6 117 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 A0A087WW49 117 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 ANKRD34BA5PLL1 514 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 S1PR2O95136 353 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 RPA2P15927 270 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 HLA-GP17693 338 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 LPAR6P43657 344 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 DGCR2P98153 550 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 SSBP1Q04837 148 aaKnown RBP10.35□□□□□ -0.75
CCL28-202ENST00000489442 ARRDC1Q8N5I2 433 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 ADAD2Q8NCV1 583 aaKnown RBP10.35□□□□□ -0.75
CCL28-202ENST00000489442 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 USMG5Q96IX5 58 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 RSRP1Q9BUV0 290 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 COMMD5Q9GZQ3 224 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 SLIRPQ9GZT3 109 aaKnown RBP10.35□□□□□ -0.75
CCL28-202ENST00000489442 AURKAIP1Q9NWT8 199 aaPredicted RBP10.35□□□□□ -0.75
CCL28-202ENST00000489442 DNAH3Q8TD57 4116 aa10.35□□□□□ -0.75
CCL28-202ENST00000489442 HMX3A6NHT5 357 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 OVOL1O14753 267 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 BRI3O95415 125 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 RAB3DO95716 219 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 KRASP01116 189 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 SLURP1P55000 103 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 UCP3P55916 312 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 DEFA5Q01523 94 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 SCGB2B2Q4G0G5 96 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 STEAP1BQ6NZ63 245 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 TBC1D26Q86UD7 250 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 TTC9CQ8N5M4 171 aa10.34□□□□□ -0.75
CCL28-202ENST00000489442 TMEM229BQ8NBD8 167 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms