RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 LIN7CQ9NUP9 197 aaKnown RBP9□□□□□ -0.97
USP11-210ENST00000489030 NUDT15Q9NV35 164 aa9□□□□□ -0.97
USP11-210ENST00000489030 FLVCR2Q9UPI3 526 aa9□□□□□ -0.97
USP11-210ENST00000489030 WASHC3Q9Y3C0 194 aa9□□□□□ -0.97
USP11-210ENST00000489030 TRAV6A0A075B6T7 132 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 C3orf85A0A1B0GTC6 90 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 PSMB11A5LHX3 300 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 CRYM-AS1A6NIL9 109 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 LINC01548A6NM66 108 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 FAM90A9PA6NNJ1 464 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 H0YJW9 148 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 DHFRP00374 187 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 ANXA3P12429 323 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 DHODHQ02127 395 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 EBI3Q14213 229 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 GLDNQ6ZMI3 551 aaPredicted RBP8.99□□□□□ -0.97
USP11-210ENST00000489030 C16orf82Q7Z2V1 217 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 PDPNQ86YL7 162 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 SPAG16Q8N0X2 631 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 MINDY2Q8NBR6 621 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 OR2T10Q8NGZ9 312 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 OR51H1Q8NH63 302 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 DDB2Q92466 427 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 DPF1Q92782 380 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 FLYWCH2Q96CP2 140 aaKnown RBP8.99□□□□□ -0.97
USP11-210ENST00000489030 RBMXL1Q96E39 390 aaKnown RBP8.99□□□□□ -0.97
USP11-210ENST00000489030 RAX2Q96IS3 184 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 GPHA2Q96T91 129 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 RNF5Q99942 180 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 AIFM2Q9BRQ8 373 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 MARVELD1Q9BSK0 173 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 NAA60Q9H7X0 242 aa8.99□□□□□ -0.97
USP11-210ENST00000489030 IGHV3-72A0A0B4J1Y9 119 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 PIGBOS1A0A0B4J2F0 54 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 INMT-MINDY4F8WBC2 141 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 RBFOX2O43251 390 aaKnown RBP eCLIP8.98□□□□□ -0.97
USP11-210ENST00000489030 FCGR3BO75015 233 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 HPRT1P00492 218 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 MOSP00540 346 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 OR4E1P0C645 316 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 NHLRC4P0CG21 123 aaPredicted RBP8.98□□□□□ -0.97
USP11-210ENST00000489030 RPA2P15927 270 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 MECP2P51608 486 aaKnown RBP8.98□□□□□ -0.97
USP11-210ENST00000489030 LINC00205P59089 165 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 RPS16P62249 146 aaKnown RBP8.98□□□□□ -0.97
USP11-210ENST00000489030 HES1Q14469 280 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 DEFB136Q30KP8 78 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 CASC10Q5T4H9 136 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 KLHL30-AS1Q8NEE0 82 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 OR4S2Q8NH73 311 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 TMEM230Q96A57 120 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 GALNT14Q96FL9 552 aa8.98□□□□□ -0.97
USP11-210ENST00000489030 NUDT19A8MXV4 375 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 H0Y980 276 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 C3orf84H3BNL1 204 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 PRAF2O60831 178 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 ATG12O94817 140 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 HRASP01112 189 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 IGKV1D-33P01593 117 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 IGKV1-33P01594 117 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 IL5P05113 134 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 SERPINE2P07093 398 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 ANXA7P20073 488 aaKnown RBP8.97□□□□□ -0.97
USP11-210ENST00000489030 VAMP1P23763 118 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 MYCNOSP40205 109 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 LPAR6P43657 344 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 LGALS7P47929 136 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 RAB25P57735 213 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 TRIM16LQ309B1 348 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 C4orf46Q504U0 113 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 TMEM177Q53S58 311 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 OR2B11Q5JQS5 317 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 OSR1Q8TAX0 266 aaPredicted RBP8.97□□□□□ -0.97
USP11-210ENST00000489030 EAF1Q96JC9 268 aaPredicted RBP8.97□□□□□ -0.97
USP11-210ENST00000489030 PLEKHA2Q9HB19 425 aa8.97□□□□□ -0.97
USP11-210ENST00000489030 GPN1Q9HCN4 374 aaPredicted RBP8.97□□□□□ -0.97
USP11-210ENST00000489030 C9orf170A2RU37 121 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 SHOXO15266 292 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 SFT2D2O95562 160 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 CRYZL1O95825 349 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 OR5AC1P0C628 307 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 SPNP16150 400 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 TMEM11P17152 192 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 UCP1P25874 307 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 BRWD1-AS2P59051 145 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 SUPT4H1P63272 117 aaKnown RBP8.96□□□□□ -0.98
USP11-210ENST00000489030 SRPXP78539 464 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 PPP1R1AQ13522 171 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 HNF4GQ14541 408 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 OXA1LQ15070 435 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 SP6Q3SY56 376 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 LYG2Q86SG7 212 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 C5orf56Q8N8D9 126 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 OR8H1Q8NGG4 311 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 GLYATL2Q8WU03 294 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 CHPT1Q8WUD6 406 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 TP53RKQ96S44 253 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 TSNAXQ99598 290 aaKnown RBP8.96□□□□□ -0.98
USP11-210ENST00000489030 GPR61Q9BZJ8 451 aa8.96□□□□□ -0.98
USP11-210ENST00000489030 TMEM222Q9H0R3 208 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms