RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 C15orf40Q8WUR7 153 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 SECTM1Q8WVN6 248 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 ZNF430Q9H8G1 570 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 IFT46Q9NQC8 304 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 RABL2AQ9UBK7 228 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 EXTL2Q9UBQ6 330 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 RABL2BQ9UNT1 228 aa10.63□□□□□ -0.71
SPTLC1-207ENST00000488921 TNCP24821 2201 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 SORL1Q92673 2214 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 FAM223BA6NKX1 122 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 PPYP01298 95 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 EIF4EP06730 217 aaKnown RBP10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 FCGR2CP31995 323 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 MRGPRG-AS1Q2M3A8 158 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 SLC25A42Q86VD7 318 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 FAM223AQ8IWN6 122 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 LAX1Q8IWV1 398 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 ADAD2Q8NCV1 583 aaKnown RBP10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 BORCS5Q969J3 196 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 AIFM2Q9BRQ8 373 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 TAS2R8Q9NYW2 309 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
SPTLC1-207ENST00000488921 FABP12A6NFH5 140 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 KBTBD11O94819 623 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 OR2A4O95047 310 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 HRASP01112 189 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 APELAP0DMC3 54 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 TNFSF8P32971 234 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 MAS1LP35410 378 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 CATR1Q13166 79 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 EIF4EBP1Q13541 118 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 SPANXN2Q5MJ10 180 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 ZNF343Q6P1L6 599 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 OR5AP2Q8NGF4 316 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 OR2A7Q96R45 310 aa10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 PEF1Q9UBV8 284 aaKnown RBP10.61□□□□□ -0.71
SPTLC1-207ENST00000488921 ANKRD34BA5PLL1 514 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 TPPPO94811 219 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 GP9P14770 177 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 SPNP16150 400 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 HERV-K104P61576 105 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 DYRK1AQ13627 763 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 IL18Q14116 193 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 TATDN3Q17R31 274 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 FAM209BQ5JX69 171 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 LINC00299Q6ZSB3 139 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 TMEM167AQ8TBQ9 72 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 SNAPC3Q92966 411 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 RSRP1Q9BUV0 290 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 SLC5A7Q9GZV3 580 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 MIXL1Q9H2W2 232 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 CCL28Q9NRJ3 127 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 ZNF257Q9Y2Q1 563 aa10.6□□□□□ -0.71
SPTLC1-207ENST00000488921 RBFOX2O43251 390 aaKnown RBP eCLIP10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 TNFSF12O43508 249 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 PRSS3P35030 304 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 RPL27AP46776 148 aaKnown RBP10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 TAS2R20P59543 309 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 FXYD4P59646 89 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 RHOGP84095 191 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 RPEL1Q2QD12 228 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 VKORC1L1Q8N0U8 176 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 PUSL1Q8N0Z8 303 aaKnown RBP10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 TTC9CQ8N5M4 171 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 OR9G4Q8NGQ1 327 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 GIMAP1Q8WWP7 306 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 WWC2-AS2Q96NR7 200 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 EHFQ9NZC4 300 aa10.59□□□□□ -0.71
SPTLC1-207ENST00000488921 TRBV9A0A0B4J1U6 114 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 MEIS3P1A6NDR6 274 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 DHFRP00374 187 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 PTHLHP12272 177 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 TAS2R46P59540 309 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 DEFA5Q01523 94 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 C10orf55Q5SWW7 151 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 TMEM17Q86X19 198 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 SNX29P2Q8IUI4 249 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 SPAG16Q8N0X2 631 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 NECAP1Q8NC96 275 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 OR4A5Q8NH83 315 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 CD300LFQ8TDQ1 290 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 S100ZQ8WXG8 99 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 AKIP1Q9NQ31 210 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 BET1LQ9NYM9 111 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 U3KQK5 164 aa10.58□□□□□ -0.72
SPTLC1-207ENST00000488921 NPIPB5A8MRT5 1133 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 HPRT1P00492 218 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 FCER2P06734 321 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 PTBP1P26599 531 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 SYNJ2BPP57105 145 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 BRWD1-AS2P59051 145 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 TAS2R31P59538 309 aa10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 RPL8P62917 257 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 MRPS10P82664 201 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-207ENST00000488921 ZNF45Q02386 682 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms