RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 SRSF8Q9BRL6 282 aaKnown RBP7.93□□□□□ -1.14
RNF220-215ENST00000487332 ZNF2Q9BSG1 426 aaPredicted RBP7.93□□□□□ -1.14
RNF220-215ENST00000487332 ZNF257Q9Y2Q1 563 aa7.93□□□□□ -1.14
RNF220-215ENST00000487332 PRKDCP78527 4128 aaKnown RBP7.93□□□□□ -1.14
RNF220-215ENST00000487332 IGHV4OR15-8A0A075B7B6 117 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 A0A087WW49 117 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 TRBV9A0A0B4J1U6 114 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 C13orf42A0A1B0GVH6 325 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 MSGN1A6NI15 193 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 FAM25AB3EWG3 89 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 FAM25CB3EWG5 89 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 FAM25GB3EWG6 89 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 SEC14L6B5MCN3 397 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 TEX22C9J3V5 150 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 K7EIL1 84 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 GPR31O00270 319 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 OVOL1O14753 267 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 ZP3P21754 424 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 RPL27AP46776 148 aaKnown RBP7.92□□□□□ -1.14
RNF220-215ENST00000487332 RPL5P46777 297 aaKnown RBP7.92□□□□□ -1.14
RNF220-215ENST00000487332 RFX2P48378 723 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 RAB25P57735 213 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 RPL8P62917 257 aaKnown RBP7.92□□□□□ -1.14
RNF220-215ENST00000487332 SSBP1Q04837 148 aaKnown RBP7.92□□□□□ -1.14
RNF220-215ENST00000487332 ZNF343Q6P1L6 599 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 ZNF429Q86V71 674 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 TMEM17Q86X19 198 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 SNX29P2Q8IUI4 249 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 LYSMD2Q8IV50 215 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 CMTM1Q8IZ96 169 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 ARRDC1Q8N5I2 433 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 RANGRFQ9HD47 186 aaPredicted RBP7.92□□□□□ -1.14
RNF220-215ENST00000487332 EXTL2Q9UBQ6 330 aa7.92□□□□□ -1.14
RNF220-215ENST00000487332 TNFSF12O43508 249 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 PMP2P02689 132 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 PRB2P02812 416 aaPredicted RBP7.91□□□□□ -1.14
RNF220-215ENST00000487332 CRYGCP07315 174 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 HLA-GP17693 338 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 F2RP25116 425 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 PTBP1P26599 531 aaKnown RBP eCLIP7.91□□□□□ -1.14
RNF220-215ENST00000487332 HLA-DMAP28067 261 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 S100GP29377 79 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 HOXD3P31249 432 aaPredicted RBP7.91□□□□□ -1.14
RNF220-215ENST00000487332 AADACL3Q5VUY0 350 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 OR4A47Q6IF82 309 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 ACSM6Q6P461 480 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 LHFPL1Q86WI0 220 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 CLVS1Q8IUQ0 354 aaPredicted RBP7.91□□□□□ -1.14
RNF220-215ENST00000487332 SLC38A6Q8IZM9 456 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 OR5T1Q8NG75 326 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 DYNC2LI1Q8TCX1 351 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 CASTOR1Q8WTX7 329 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 DCUN1D4Q92564 292 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 ZNF486Q96H40 463 aaPredicted RBP7.91□□□□□ -1.14
RNF220-215ENST00000487332 MS4A10Q96PG2 267 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 OR5B12Q96R08 314 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 ALX4Q9H161 411 aaPredicted RBP7.91□□□□□ -1.14
RNF220-215ENST00000487332 COA4Q9NYJ1 87 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 MTFP1Q9UDX5 166 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 SCOCQ9UIL1 159 aa7.91□□□□□ -1.14
RNF220-215ENST00000487332 WNK1Q9H4A3 2382 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 GABARAPH6UMI1 98 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 CTDSPLO15194 276 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 MPPED1O15442 326 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 NOL3O60936 208 aaKnown RBP7.9□□□□□ -1.14
RNF220-215ENST00000487332 PGLYRP1O75594 196 aaPredicted RBP7.9□□□□□ -1.14
RNF220-215ENST00000487332 S1PR2O95136 353 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 DHFRP00374 187 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 CD74P04233 296 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 RLN1P04808 185 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 FCER2P06734 321 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 SLURP1P55000 103 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 RND3P61587 244 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 SPCS2Q15005 226 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 C10orf55Q5SWW7 151 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 HSD17B13Q7Z5P4 300 aaPredicted RBP7.9□□□□□ -1.14
RNF220-215ENST00000487332 VKORC1L1Q8N0U8 176 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 NECAP1Q8NC96 275 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 OR51H1Q8NH63 302 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 DLX4Q92988 240 aaPredicted RBP7.9□□□□□ -1.14
RNF220-215ENST00000487332 DGCR14Q96DF8 476 aaKnown RBP7.9□□□□□ -1.14
RNF220-215ENST00000487332 GPHA2Q96T91 129 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 RSRP1Q9BUV0 290 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 MIXL1Q9H2W2 232 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 SLC2A9Q9NRM0 540 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 ZNF355PQ9NSJ1 428 aa7.9□□□□□ -1.14
RNF220-215ENST00000487332 WI2-2373I1.2A0A1W2PRP0 233 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 MARCH11A6NNE9 402 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 UPK2O00526 184 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 IGHV3-11P01762 117 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 HIST1H1BP16401 226 aaKnown RBP7.89□□□□□ -1.15
RNF220-215ENST00000487332 CTRB1P17538 263 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 ECI1P42126 302 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 ERVK-16P61578 105 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 TSPAN5P62079 268 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 RHOGP84095 191 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 ZNF45Q02386 682 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 RNASE10Q5GAN6 216 aaKnown RBP7.89□□□□□ -1.15
RNF220-215ENST00000487332 CTRB2Q6GPI1 263 aa7.89□□□□□ -1.15
RNF220-215ENST00000487332 LAX1Q8IWV1 398 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms