RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 DEPPQ9NTK1 212 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 SAA2-SAA4A0A096LPE2 208 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 BMPR1BO00238 502 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 MPDU1O75352 247 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 CCL2P13500 99 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 CRYBB3P26998 211 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 UQCRFS1P47985 274 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 PSG9Q00887 426 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 PSG5Q15238 335 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 RAB30Q15771 203 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 SMIM21Q3B7S5 101 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 ZNF585BQ52M93 769 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 TRIM61Q5EBN2 209 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 SAMD13Q5VXD3 122 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM136Q6ZRR5 245 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM251Q8N6I4 163 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 Q8N976 141 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 OR8B3Q8NGG8 313 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM45BQ96B21 275 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 HS3ST6Q96QI5 342 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 FAM234AQ9H0X4 552 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 CLEC5AQ9NY25 188 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 DLL3Q9NYJ7 618 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 WDR83OSQ9Y284 106 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 CACNA1DQ01668 2161 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 ASXL3Q9C0F0 2248 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 NPY1RP25929 384 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 CX3CL1P78423 397 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 PLP2Q04941 152 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 TNXAQ16473 311 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 ZNF841Q6ZN19 808 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 ZIC4Q8N9L1 334 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 Q8NFD4 153 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 CPT1CQ8TCG5 803 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 RAB1CQ92928 201 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 ST20Q9HBF5 79 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 YTHDF2Q9Y5A9 579 aaKnown RBP5.24□□□□□ -1.57
VPS13D-209ENST00000487188 C9JCJ5 164 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 K7EN84 100 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 STAG3L2P0CL84 134 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 STAG3L3P0CL85 134 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 GABRG2P18507 467 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 RPL24P83731 157 aaKnown RBP5.23□□□□□ -1.57
VPS13D-209ENST00000487188 PSG7Q13046 419 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM92Q6UXU6 159 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 C20orf204Q6ZNR8 217 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 Q6ZSR3 168 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 LINC00596Q86U02 117 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 WFDC8Q8IUA0 241 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 SCCPDHQ8NBX0 429 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 SSBP3Q9BWW4 388 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-209ENST00000487188 SH3BGRL2Q9UJC5 107 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 SELENOKQ9Y6D0 94 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 COL4A2P08572 1712 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 A0A096LPE4 126 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 A0A1W2PPZ6 126 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 TAX1BP3O14907 124 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 CXCL13O43927 109 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 RAMP3O60896 148 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 REG1AP05451 166 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 OPRK1P41145 380 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 LTC4SQ16873 150 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 CEACAM21Q3KPI0 293 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 BPIFA4PQ86YQ2 179 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 NANOS1Q8WY41 292 aaKnown RBP5.23□□□□□ -1.57
VPS13D-209ENST00000487188 SH2D2AQ9NP31 389 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 SDK2Q58EX2 2172 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 IGHV3-64DA0A0J9YX35 117 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 hDV102S1A0JD36 115 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 CORTO00230 105 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 GNG7O60262 68 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 HAND1O96004 215 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 GNG3P63215 75 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 FOXL2NBQ6ZUU3 175 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 NHLRC2Q8NBF2 726 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM167BQ9NRX6 74 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 MRPL27Q9P0M9 148 aaKnown RBP5.23□□□□□ -1.57
VPS13D-209ENST00000487188 V9GYV3 84 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM265A0A087WTH1 108 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 TRGV10A0A0A0MS01 117 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 A0A0J9YW62 118 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 SAP30O75446 220 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 RHBDL1O75783 438 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 CLDN14O95500 239 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 CGAP01215 116 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 IGHV4-34P06331 123 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 LINC00271P0C7V0 271 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 HTR1DP28221 377 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 PLP1P60201 277 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 RHOGP84095 191 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 BVES-AS1Q5T3Y7 98 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 SSX8Q7RTT4 187 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 YRDCQ86U90 279 aaKnown RBP5.23□□□□□ -1.57
VPS13D-209ENST00000487188 C18orf32Q8TCD1 76 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 GALMQ96C23 342 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 OSTCQ9NRP0 149 aa5.23□□□□□ -1.57
VPS13D-209ENST00000487188 C7orf71A4D174 169 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 IZUMO1RA6ND01 250 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 LEPROTL1O95214 131 aa5.22□□□□□ -1.57
VPS13D-209ENST00000487188 NGFP01138 241 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms