RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ZNF101Q8IZC7 436 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 SPERTQ8NA61 448 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 OR2AE1Q8NHA4 323 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 LYPD6BQ8NI32 183 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CA5BP1Q8WTZ4 195 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 PP6455Q8WZ26 134 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 RNASE6Q93091 150 aaKnown RBP2.86□□□□□ -1.95
PTCD3-216ENST00000487043 BCL2L14Q9BZR8 327 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CHST5Q9GZS9 411 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 C6orf62Q9GZU0 229 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-216ENST00000487043 PLEKHA1Q9HB21 404 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 BEX1Q9HBH7 125 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 RETNQ9HD89 108 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 ABCB9Q9NP78 766 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 KCNJ16Q9NPI9 418 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 PLSCR3Q9NRY6 295 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 TAS2R4Q9NYW5 299 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 XCL2Q9UBD3 114 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 PRELID1Q9Y255 219 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 GOLT1BQ9Y3E0 138 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 MYO7BQ6PIF6 2116 aa2.86□□□□□ -1.95
PTCD3-216ENST00000487043 CACNA1BQ00975 2339 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 TRBV9A0A0B4J1U6 114 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 IGHV2OR16-5A0A0B4J2B6 119 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 IGKV1-9A0A0C4DH69 117 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF816-ZNF321PA0A0X1KG74 233 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 KBTBD11-OT1A0A1B0GTJ5 212 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 PSMB11A5LHX3 300 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 NKX2-6A6NCS4 301 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 FAM231BA6NCW3 169 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 DPRXA6NFQ7 191 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 GGT3PA6NGU5 568 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CD300LBA8K4G0 201 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 M0R1B8 84 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 MRPS12O15235 138 aaKnown RBP2.85□□□□□ -1.95
PTCD3-216ENST00000487043 RGS5O15539 181 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 GMDSO60547 372 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 PAHP00439 452 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 NRASP01111 189 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CSF3P09919 207 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 PRKACBP22694 351 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 HTR2CP28335 458 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 GLRXP35754 106 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF93P35789 620 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-216ENST00000487043 EVX1P49640 407 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF83P51522 516 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CLDN12P56749 244 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 DEFA1P59665 94 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 DEFA3P59666 94 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 GNG2P59768 71 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ERVS71-1P61550 626 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 PPP1CBP62140 327 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 REG3AQ06141 175 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 PSG7Q13046 419 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 KISS1Q15726 138 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF181Q2M3W8 571 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 VAX1Q5SQQ9 334 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CLVS2Q5SYC1 327 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 HES5Q5TA89 166 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CTRB2Q6GPI1 263 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR52W1Q6IF63 320 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 XKRXQ6PP77 449 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ASCL4Q6XD76 172 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ANGPTL5Q86XS5 388 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR5AS1Q8N127 324 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 C11orf42Q8N5U0 333 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 LINC00612Q8N6U2 182 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR51D1Q8NGF3 324 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR51A2Q8NGJ7 313 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR1N2Q8NGR9 330 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR13C9Q8NGT0 318 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR5H6Q8NGV6 325 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 SLC25A40Q8TBP6 338 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 SUN5Q8TC36 379 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 KLF14Q8TD94 323 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-216ENST00000487043 GPX8Q8TED1 209 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 GLYATL2Q8WU03 294 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 PTX4Q96A99 478 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 FAM3DQ96BQ1 224 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CMBLQ96DG6 245 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 BORCS8Q96FH0 119 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 S100A16Q96FQ6 103 aaKnown RBP2.85□□□□□ -1.95
PTCD3-216ENST00000487043 DIRAS2Q96HU8 199 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM101Q96IK0 257 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CEP19Q96LK0 163 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 WFIKKN1Q96NZ8 548 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 RASL11BQ9BPW5 248 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 UQCC2Q9BRT2 126 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR2J1Q9GZK6 312 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 ABCG5Q9H222 651 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 MIXL1Q9H2W2 232 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 METTL17Q9H7H0 456 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CCL28Q9NRJ3 127 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 COMMD3Q9UBI1 195 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CLN8Q9UBY8 286 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 OR5V1Q9UGF6 321 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 SLC7A11Q9UPY5 501 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 RHBDD3Q9Y3P4 386 aa2.85□□□□□ -1.95
PTCD3-216ENST00000487043 CHTOPQ9Y3Y2 248 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms