RNA–Protein interactions for RNA: ENST00000485748.5

ATAD3B-205, Transcript of ATPase family, AAA domain containing 3B, human

TSL 2

Gene ATAD3B, Length 3,233 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATAD3B-205	ENST00000485748	MMP23A	O75900	390 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	PLAU	P00749	431 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LSM10	Q969L4	123 aa	Known RBP	12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748		H3BQ15	152 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	CCL21	O00585	134 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ZG16	O60844	167 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ELL	P55199	621 aa	Predicted RBP	12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	PRB3	Q04118	309 aa	Predicted RBP	12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	HEPN1	Q6WQI6	88 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	CYB561D1	Q8N8Q1	229 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	SCGB1C1	Q8TD33	95 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	RAB39B	Q96DA2	213 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	HINT2	Q9BX68	163 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	RBKS	Q9H477	322 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	PKD1L2	Q7Z442	2459 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	DYSF	O75923	2080 aa		12.5	□□□□□ -0.41
ATAD3B-205	ENST00000485748	TRGV10	A0A0A0MS01	117 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	C17orf100	A8MU93	164 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LYNX1	G3V0Z9	82 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LHB	P01229	141 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ADH4	P08319	380 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LYNX1	P0DP58	116 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	NDUFAF3	Q9BU61	184 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ELOVL5	Q9NYP7	299 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	CACNA1B	Q00975	2339 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	MSMO1	Q15800	293 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	PRAMEF5	Q5TYX0	476 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	OR6C3	Q9NZP0	311 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	UBE2L5P	A0A1B0GUS4	154 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	HMGB3	O15347	200 aa	Known RBP	12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	RPL29	P47914	159 aa	Known RBP	12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	R3HDM4	Q96D70	268 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ATP5S	Q99766	215 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	PBDC1	Q9BVG4	233 aa		12.49	□□□□□ -0.41
ATAD3B-205	ENST00000485748	TCF21	O43680	179 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	TNFRSF1A	P19438	455 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LY6D	Q14210	128 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748		Q8WTZ3	238 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	OPN1MW	P04001	364 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	TRGC1	P0CF51	173 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	OPN1MW2	P0DN77	364 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	OPN1MW3	P0DN78	364 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	DLK1	P80370	383 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	C1orf229	Q6ZS94	237 aa	Predicted RBP	12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ARV1	Q9H2C2	271 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ZNF665	Q9H7R5	613 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	SSUH2	Q9Y2M2	353 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	WSB1	Q9Y6I7	421 aa		12.48	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ZFP92	A6NM28	416 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	CCL3L1	P16619	93 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	DUT	P33316	252 aa	Known RBP	12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	CFHR2	P36980	270 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LCN15	Q6UWW0	184 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	GAFA1	Q96PS6	74 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LRRC30	A6NM36	301 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	FGF8	P55075	233 aa	Predicted RBP	12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LOXL3	P58215	753 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	LBH	Q53QV2	105 aa	Predicted RBP	12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	HAPLN4	Q86UW8	402 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ZBTB34	Q8NCN2	500 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	OR4C12	Q96R67	309 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	MAP1A	P78559	2803 aa	Predicted RBP	12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ASH1L	Q9NR48	2969 aa	Known RBP	12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	RBFOX3	A6NFN3	312 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	HTD2	P86397	168 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	BAX	Q07812	192 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	C17orf58	Q2M2W7	97 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	CT45A1	Q5HYN5	189 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	CT45A3	Q8NHU0	189 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	FRZB	Q92765	325 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	S1PR3	Q99500	378 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	HSD17B10	Q99714	261 aa	Known RBP	12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	VSIR	Q9H7M9	311 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ZNF835	Q9Y2P0	537 aa		12.47	□□□□□ -0.41
ATAD3B-205	ENST00000485748	TRAV3	A0A0B4J244	114 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748		E7EQL1	145 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	DLEU1	O43261	78 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	REG1B	P48304	166 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	STUM	Q69YW2	141 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ZNF429	Q86V71	674 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	HIST1H2BL	Q99880	126 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	ELOVL1	Q9BW60	279 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	QTRT1	Q9BXR0	403 aa	Known RBP	12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	GNG13	Q9P2W3	67 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	JPT1	Q9UK76	154 aa		12.46	□□□□□ -0.41
ATAD3B-205	ENST00000485748	VSTM5	A8MXK1	200 aa		12.46	□□□□□ -0.42
ATAD3B-205	ENST00000485748	OR9G9	P0C7N8	305 aa		12.46	□□□□□ -0.42
ATAD3B-205	ENST00000485748	C1QTNF9	P0C862	333 aa		12.46	□□□□□ -0.42
ATAD3B-205	ENST00000485748	MMP9	P14780	707 aa		12.46	□□□□□ -0.42
ATAD3B-205	ENST00000485748	RPL31	P62899	125 aa	Known RBP	12.46	□□□□□ -0.42
ATAD3B-205	ENST00000485748	SLC38A11	Q08AI6	406 aa		12.46	□□□□□ -0.42
ATAD3B-205	ENST00000485748	CDSN	Q15517	529 aa		12.46	□□□□□ -0.42
ATAD3B-205	ENST00000485748	SLC25A10	Q9UBX3	287 aa	Predicted RBP	12.46	□□□□□ -0.42
ATAD3B-205	ENST00000485748	KBTBD11-OT1	A0A1B0GTJ5	212 aa		12.45	□□□□□ -0.42
ATAD3B-205	ENST00000485748	DLX1	P56177	255 aa		12.45	□□□□□ -0.42
ATAD3B-205	ENST00000485748	RAB11A	P62491	216 aa		12.45	□□□□□ -0.42
ATAD3B-205	ENST00000485748	RNF151	Q2KHN1	245 aa		12.45	□□□□□ -0.42
ATAD3B-205	ENST00000485748	LYPD2	Q6UXB3	125 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms