RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 PCNPQ8WW12 178 aaKnown RBP5.09□□□□□ -1.59
CLK1-212ENST00000482590 TMEM80Q96HE8 168 aa5.09□□□□□ -1.59
CLK1-212ENST00000482590 FAM218AQ96MZ4 157 aa5.09□□□□□ -1.59
CLK1-212ENST00000482590 SCGB3A2Q96PL1 93 aa5.09□□□□□ -1.59
CLK1-212ENST00000482590 EFCAB1Q9HAE3 211 aa5.09□□□□□ -1.59
CLK1-212ENST00000482590 ACOT13Q9NPJ3 140 aa5.09□□□□□ -1.59
CLK1-212ENST00000482590 DIABLOQ9NR28 239 aa5.09□□□□□ -1.59
CLK1-212ENST00000482590 GOLT1BQ9Y3E0 138 aa5.09□□□□□ -1.59
CLK1-212ENST00000482590 IGHV1-69DA0A0B4J2H0 117 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 RPS10-NUDT3A0A1W2PQS6 291 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 MEIOCA2RUB1 952 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 ZNF878C9JN71 531 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 LOC110117498-PIK3R3F6TDL0 507 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 SMKR1H3BMG3 65 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 CCRL2O00421 344 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 BHLHE40O14503 412 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 BUB3O43684 328 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 IGHV1-69P01742 117 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 IGHV4-59P01825 116 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 GYPAP02724 150 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 FABP3P05413 133 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 FBP1P09467 338 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 SLC2A1P11166 492 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 CD36P16671 472 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 PVALBP20472 110 aaPredicted RBP5.08□□□□□ -1.6
CLK1-212ENST00000482590 BCL3P20749 454 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 FCGR2CP31995 323 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 RPS27P42677 84 aaKnown RBP5.08□□□□□ -1.6
CLK1-212ENST00000482590 FAM3AP98173 230 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 ARL6IP1Q15041 203 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 PTGES3Q15185 160 aaKnown RBP5.08□□□□□ -1.6
CLK1-212ENST00000482590 TAF9Q16594 264 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 GLYATL3Q5SZD4 288 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 RPL13AP3Q6NVV1 102 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 SLC36A1Q7Z2H8 476 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 VMO1Q7Z5L0 202 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 SLC51BQ86UW2 128 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 NAA40Q86UY6 237 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 PDZD9Q8IXQ8 264 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 PUSL1Q8N0Z8 303 aaKnown RBP5.08□□□□□ -1.6
CLK1-212ENST00000482590 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.08□□□□□ -1.6
CLK1-212ENST00000482590 OR1M1Q8NGA1 313 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 OR2T4Q8NH00 348 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 LRRC29Q8WV35 223 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 KCTD7Q96MP8 289 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 ARL2BPQ9Y2Y0 163 aa5.08□□□□□ -1.6
CLK1-212ENST00000482590 IGHV3OR15-7A0A075B7D8 119 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 NDUFB3O43676 98 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 SSNA1O43805 119 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 FKBP6O75344 327 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 ATP6V1G2O95670 118 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 MUC1P15941 1255 aaPredicted RBP5.07□□□□□ -1.6
CLK1-212ENST00000482590 PYCR1P32322 319 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 KIR2DS4P43632 304 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 RFX2P48378 723 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 PSME3P61289 254 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 GRB2P62993 217 aaKnown RBP5.07□□□□□ -1.6
CLK1-212ENST00000482590 ZNF92Q03936 586 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 KIAA0141Q14154 515 aaPredicted RBP5.07□□□□□ -1.6
CLK1-212ENST00000482590 RSPO1Q2MKA7 263 aaPredicted RBP5.07□□□□□ -1.6
CLK1-212ENST00000482590 TEX36Q5VZQ5 186 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 ZNF826PQ6ZT77 177 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 FTMTQ8N4E7 242 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 OR9Q1Q8NGQ5 310 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 OR56B4Q8NH76 319 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 LINC01006Q8NI28 216 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 GNPDA2Q8TDQ7 276 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 H1FXQ92522 213 aaKnown RBP5.07□□□□□ -1.6
CLK1-212ENST00000482590 EEF1AKMT3Q96AZ1 226 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 SLAMF6Q96DU3 332 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 SDHCQ99643 169 aaPredicted RBP5.07□□□□□ -1.6
CLK1-212ENST00000482590 TLNRD1Q9H1K6 362 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 ABCB9Q9NP78 766 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.07□□□□□ -1.6
CLK1-212ENST00000482590 ZNRD1Q9P1U0 126 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 KAAG1Q9UBP8 84 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 RPUSD1Q9UJJ7 312 aaKnown RBP5.07□□□□□ -1.6
CLK1-212ENST00000482590 VPREB3Q9UKI3 123 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 PSG11Q9UQ72 335 aa5.07□□□□□ -1.6
CLK1-212ENST00000482590 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 LOC100131303A0A0U1RQF7 123 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 K7EMT4 169 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 ZNF593O00488 134 aaPredicted RBP5.06□□□□□ -1.6
CLK1-212ENST00000482590 APOC1P02654 83 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 RLN2P04090 185 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 CD74P04233 296 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 OR8U9P0C7N5 309 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 HTR1DP28221 377 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 HTR1FP30939 366 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 FMO3P31513 532 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 HRH1P35367 487 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 TRAM1Q15629 374 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 LRRC10Q5BKY1 277 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 WDR38Q5JTN6 314 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 FAM27D1Q5T7N8 215 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 ZNF57Q68EA5 555 aaPredicted RBP5.06□□□□□ -1.6
CLK1-212ENST00000482590 GDPD3Q7L5L3 318 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 S100A7AQ86SG5 101 aa5.06□□□□□ -1.6
CLK1-212ENST00000482590 CBLN2Q8IUK8 224 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms