RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 PLA2G5P39877 138 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 THBS3P49746 956 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 PKIAP61925 76 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 RAB31Q13636 194 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 C3orf36Q3SXR2 165 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 ACTL10Q5JWF8 245 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 TIMM23BQ5SRD1 257 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 ZADH2Q8N4Q0 377 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 OR5T1Q8NG75 326 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 ADTRPQ96IZ2 230 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 IMMP2LQ96T52 175 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 GGTLC1Q9BX51 225 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 MS4A5Q9H3V2 200 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 NPVFQ9HCQ7 196 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 INTS1Q8N201 2190 aaKnown RBP12.7□□□□□ -0.38
C9orf3-218ENST00000482056 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 MT-CO2P00403 227 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 DEFA4P12838 97 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 GLRXP35754 106 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 GNB1P62873 340 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 DEFB109BQ30KR1 87 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 GCSAMLQ5JQS6 135 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 C9orf152Q5JTZ5 239 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 ALKBH2Q6NS38 261 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 LINC01551Q86U37 167 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 LRP11Q86VZ4 500 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 VKORC1L1Q8N0U8 176 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 ZNRF1Q8ND25 227 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 Q8TCH9 128 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 RNASEH2CQ8TDP1 164 aaKnown RBP12.7□□□□□ -0.38
C9orf3-218ENST00000482056 MGST2Q99735 147 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 PRDM13Q9H4Q3 707 aa12.7□□□□□ -0.38
C9orf3-218ENST00000482056 PATZ1Q9HBE1 687 aaKnown RBP12.7□□□□□ -0.38
C9orf3-218ENST00000482056 C15orf61A6NNL5 157 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 NDUFB4O95168 129 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 STAG3L2P0CL84 134 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 STAG3L3P0CL85 134 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 NPPCP23582 126 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 ATP5G3P48201 142 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 SELENOVP59797 346 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 CDPF1Q6NVV7 123 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 DEFB124Q8NES8 71 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 DDB2Q92466 427 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 SDSLQ96GA7 329 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 CHODLQ9H9P2 273 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 TRGV10A0A0A0MS01 117 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 LHBP01229 141 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 CHRNA7P36544 502 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 ZNF134P52741 427 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 MIC13Q5XKP0 118 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 ABHD12Q8N2K0 398 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 CORO2AQ92828 525 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 TMEM204Q9BSN7 226 aa12.69□□□□□ -0.38
C9orf3-218ENST00000482056 FOXA2Q9Y261 457 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-218ENST00000482056 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 SPRY3O43610 288 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 IGHV3-7P01780 117 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 RHOBP62745 196 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 GAMTQ14353 236 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 CLEC12BQ2HXU8 276 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 FAM78BQ5VT40 261 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 TEPPQ6URK8 271 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 ITLN1Q8WWA0 313 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 FUT9Q9Y231 359 aa12.68□□□□□ -0.38
C9orf3-218ENST00000482056 TRAV3A0A0B4J244 114 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 KBTBD11-OT1A0A1B0GTJ5 212 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 AMBPP02760 352 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 NPY1RP25929 384 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 PDLIM4P50479 330 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 HSPE1P61604 102 aaKnown RBP12.67□□□□□ -0.38
C9orf3-218ENST00000482056 JOSD1Q15040 202 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-218ENST00000482056 MSMPQ1L6U9 139 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 TMEM30BQ3MIR4 351 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 SLC24A4Q8NFF2 622 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 RHOVQ96L33 236 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 RNF7Q9UBF6 113 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 CELSR3Q9NYQ7 3312 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 SPAARA0A1B0GVQ0 90 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 SLC31A2O15432 143 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 CGB3P0DN86 165 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 CGB7P0DN87 165 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 WT1P19544 449 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-218ENST00000482056 GATA4P43694 442 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 NUBP1P53384 320 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 MRPS11P82912 194 aaKnown RBP12.67□□□□□ -0.38
C9orf3-218ENST00000482056 C17orf58Q2M2W7 97 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 VHLLQ6RSH7 139 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 FAM222BQ8WU58 562 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 TMEM37Q8WXS4 190 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 TMEM14BQ9NUH8 114 aa12.67□□□□□ -0.38
C9orf3-218ENST00000482056 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
C9orf3-218ENST00000482056 SAA2-SAA4A0A096LPE2 208 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 CEACAM4O75871 244 aa12.66□□□□□ -0.38
C9orf3-218ENST00000482056 IL6RP08887 468 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-218ENST00000482056 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-218ENST00000482056 BMP5P22003 454 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms