RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 FCER2P06734 321 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 OR8U9P0C7N5 309 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 SAA2P0DJI9 122 aaPredicted RBP6.65□□□□□ -1.34
USP54-212ENST00000480210 SPP1P10451 314 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 TPT1P13693 172 aaKnown RBP6.65□□□□□ -1.34
USP54-212ENST00000480210 HRH1P35367 487 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 THBS3P49746 956 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 HERV-K104P61576 105 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 PKIAP61925 76 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 DGCR2P98153 550 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 PRB3Q04118 309 aaPredicted RBP6.65□□□□□ -1.34
USP54-212ENST00000480210 SLC9A3R2Q15599 337 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 ANKRD39Q53RE8 183 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 STEAP1BQ6NZ63 245 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 ZNF66Q6ZN08 573 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 MOB3BQ86TA1 216 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 ZDHHC22Q8N966 263 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 INO80EQ8NBZ0 244 aaPredicted RBP6.65□□□□□ -1.34
USP54-212ENST00000480210 OR2T10Q8NGZ9 312 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 OR8U1Q8NH10 309 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 MOB3AQ96BX8 217 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 CYYR1Q96J86 154 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 HSD17B10Q99714 261 aaKnown RBP6.65□□□□□ -1.34
USP54-212ENST00000480210 SLC25A21Q9BQT8 299 aaPredicted RBP6.65□□□□□ -1.34
USP54-212ENST00000480210 ZNF2Q9BSG1 426 aaPredicted RBP6.65□□□□□ -1.34
USP54-212ENST00000480210 VPREB3Q9UKI3 123 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 TCF19Q9Y242 345 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 TMED3Q9Y3Q3 217 aa6.65□□□□□ -1.34
USP54-212ENST00000480210 A0A1B0GUS0 222 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 A0A1W2PPI3 338 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 A6NDX4 124 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 DNAJC9-AS1A6NH13 148 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 FAM74A7A6NL05 159 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 G3V3Q6 166 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 H3BUX3 64 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 FGF16O43320 207 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 APOA2P02652 100 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 CD3DP04234 171 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 HLA-GP17693 338 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 KIR2DS2P43631 304 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 CATR1Q13166 79 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 SURF2Q15527 256 aaPredicted RBP6.64□□□□□ -1.35
USP54-212ENST00000480210 KRTAP21-3Q3LHN1 58 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 FAM74A3Q4VXF1 159 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 LDLRAD2Q5SZI1 272 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 C11orf88Q6PI97 169 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 REC114Q7Z4M0 266 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 C5orf24Q7Z6I8 188 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 ZNF546Q86UE3 836 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 PDPNQ86YL7 162 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 CMTM1Q8IZ96 169 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 PUSL1Q8N0Z8 303 aaKnown RBP6.64□□□□□ -1.35
USP54-212ENST00000480210 DYNAPQ8N1N2 210 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 TCTEX1D1Q8N7M0 179 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 OR5AN1Q8NGI8 311 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 TERB2Q8NHR7 220 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 CFHR4Q92496 578 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 ABHD14BQ96IU4 210 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 PRRT1Q99946 306 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 NABP2Q9BQ15 211 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 C2orf88Q9BSF0 95 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 OR2D2Q9H210 308 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 HRASLSQ9HDD0 168 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 FAM212BQ9NTI7 297 aaPredicted RBP6.64□□□□□ -1.35
USP54-212ENST00000480210 RNF150Q9ULK6 438 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 SVEP1Q4LDE5 3571 aa6.64□□□□□ -1.35
USP54-212ENST00000480210 FXYD6-FXYD2A0A087WZ82 144 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 MDFIC2A0A1B0GVS7 189 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 RNF222A6NCQ9 220 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 RNF212BA8MTL3 300 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 GPR31O00270 319 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 TAAR5O14804 337 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 TIMM23O14925 209 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 VENTXO95231 258 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 MOSP00540 346 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 IGHV4-59P01825 116 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 CT45A6P0DMU7 189 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 CT45A5P0DMU8 189 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 CT45A7P0DMV0 189 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 AADACP22760 399 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 MAS1LP35410 378 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 LGALS7P47929 136 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 PJVKQ0ZLH3 352 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 C2CD3Q4AC94 2353 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 C4orf46Q504U0 113 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 OR2B11Q5JQS5 317 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 UTF1Q5T230 341 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 LHFPL1Q86WI0 220 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 DRAM1Q8N682 238 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 OR4C13Q8NGP0 309 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 PIFOQ8TCI5 191 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 CD300LFQ8TDQ1 290 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 TMEM158Q8WZ71 300 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 NOL4LQ96MY1 436 aaPredicted RBP6.63□□□□□ -1.35
USP54-212ENST00000480210 SLC5A7Q9GZV3 580 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 FXYD6Q9H0Q3 95 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 SLC2A8Q9NY64 477 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 WASHC3Q9Y3C0 194 aa6.63□□□□□ -1.35
USP54-212ENST00000480210 SOX21Q9Y651 276 aaPredicted RBP6.63□□□□□ -1.35
USP54-212ENST00000480210 MXRA5Q9NR99 2828 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms