RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 RLN1P04808 185 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 FCGR3AP08637 254 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 ARPC4P59998 168 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 RRAS2P62070 204 aaPredicted RBP11.13□□□□□ -0.63
ATG4B-218ENST00000479554 CX3CL1P78423 397 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 CDK10Q15131 360 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 SRSF7Q16629 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
ATG4B-218ENST00000479554 SCGB2B2Q4G0G5 96 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 C19orf54Q5BKX5 351 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 ASPHD1Q5U4P2 390 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 OR5AP2Q8NGF4 316 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 MED28Q9H204 178 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 GPN1Q9HCN4 374 aaPredicted RBP11.13□□□□□ -0.63
ATG4B-218ENST00000479554 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 RNF150Q9ULK6 438 aa11.13□□□□□ -0.63
ATG4B-218ENST00000479554 KMT2CQ8NEZ4 4911 aaKnown RBP11.12□□□□□ -0.63
ATG4B-218ENST00000479554 TRDCB7Z8K6 153 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 SOX15O60248 233 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 INSL3P51460 131 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 TSPAN5P62079 268 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 TMEM267Q0VDI3 215 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-218ENST00000479554 DRAXINQ8NBI3 349 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-218ENST00000479554 OR13C8Q8NGS7 320 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 MAFIPQ8WZ33 124 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 SCGB3A2Q96PL1 93 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 TSNAXQ99598 290 aaKnown RBP11.12□□□□□ -0.63
ATG4B-218ENST00000479554 RNF5Q99942 180 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 ALX4Q9H161 411 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-218ENST00000479554 EHFQ9NZC4 300 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 METTL1Q9UBP6 276 aaKnown RBP11.12□□□□□ -0.63
ATG4B-218ENST00000479554 ANXA10Q9UJ72 324 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 ZNF256Q9Y2P7 627 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-218ENST00000479554 TENM3Q9P273 2699 aa11.12□□□□□ -0.63
ATG4B-218ENST00000479554 IGKV1-6A0A0C4DH72 117 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 SNRPGP15A8MWD9 76 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 FCN1O00602 326 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 SPDEFO95238 335 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 LY86O95711 162 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 CA2P00918 260 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 APOA2P02652 100 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 ANXA7P20073 488 aaKnown RBP11.11□□□□□ -0.63
ATG4B-218ENST00000479554 CBX3Q13185 183 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 UNQ5815/PRO19632Q6UWF5 114 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 Q6ZS49 121 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 OVCH2Q7RTZ1 564 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 PPP1R27Q86WC6 154 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 PDPNQ86YL7 162 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 OR4A4PQ8NGN8 299 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 OR6F1Q8NGZ6 308 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 TERB2Q8NHR7 220 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 CLCC1Q96S66 551 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 RDH8Q9NYR8 311 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 GAB2Q9UQC2 676 aa11.11□□□□□ -0.63
ATG4B-218ENST00000479554 LSM4Q9Y4Z0 139 aaKnown RBP11.11□□□□□ -0.63
ATG4B-218ENST00000479554 IGKV1D-8A0A087WSZ0 117 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 LINC01619G3V211 115 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 BOLA2-SMG1P6H3BVE0 249 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 M0R1X1 148 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 OVOL1O14753 267 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 BET1O15155 118 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 FABP7O15540 132 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 SSNA1O43805 119 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 CREBL2O60519 120 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-218ENST00000479554 PROP1O75360 226 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 LGALS1P09382 135 aaKnown RBP11.1□□□□□ -0.63
ATG4B-218ENST00000479554 EGR2P11161 476 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-218ENST00000479554 RPS16P62249 146 aaKnown RBP11.1□□□□□ -0.63
ATG4B-218ENST00000479554 CD300CQ08708 224 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 PSG5Q15238 335 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-218ENST00000479554 DCUN1D4Q92564 292 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 WWC2-AS2Q96NR7 200 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 FAM103A1Q9BTL3 118 aaKnown RBP11.1□□□□□ -0.63
ATG4B-218ENST00000479554 TOLLIPQ9H0E2 274 aa11.1□□□□□ -0.63
ATG4B-218ENST00000479554 NBEAL2Q6ZNJ1 2754 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 NHLRC4P0CG21 123 aaPredicted RBP11.09□□□□□ -0.63
ATG4B-218ENST00000479554 SLURP1P55000 103 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 LINC00205P59089 165 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 AKIRIN2Q53H80 203 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 ZNF562Q6V9R5 426 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 ZNF429Q86V71 674 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 LHFPL1Q86WI0 220 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 LFNGQ8NES3 379 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 ARPC1AQ92747 370 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
ATG4B-218ENST00000479554 ST6GAL2Q96JF0 529 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 SEC22CQ9BRL7 303 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 CABLES2Q9BTV7 478 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 OR2D2Q9H210 308 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 TPSG1Q9NRR2 321 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 SLC35D1Q9NTN3 355 aa11.09□□□□□ -0.63
ATG4B-218ENST00000479554 IGHV4OR15-8A0A075B7B6 117 aa11.08□□□□□ -0.64
ATG4B-218ENST00000479554 A0A087WW49 117 aa11.08□□□□□ -0.64
ATG4B-218ENST00000479554 SLC25A17O43808 307 aa11.08□□□□□ -0.64
ATG4B-218ENST00000479554 SAP30O75446 220 aa11.08□□□□□ -0.64
ATG4B-218ENST00000479554 TPPP2P59282 170 aa11.08□□□□□ -0.64
ATG4B-218ENST00000479554 TAS2R31P59538 309 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms