RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 LYSMD2Q8IV50 215 aa16.69■□□□□ 0.26
COL9A3-211ENST00000477612 OR4A5Q8NH83 315 aa16.69■□□□□ 0.26
COL9A3-211ENST00000477612 MOB3AQ96BX8 217 aa16.69■□□□□ 0.26
COL9A3-211ENST00000477612 PEF1Q9UBV8 284 aaKnown RBP16.69■□□□□ 0.26
COL9A3-211ENST00000477612 SMIM31A0A1B0GVY4 71 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 TEX22C9J3V5 150 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 E7EUB6 86 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 MPPED1O15442 326 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 SAP30O75446 220 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 HPRT1P00492 218 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 TAS2R31P59538 309 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 KLF5Q13887 457 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-211ENST00000477612 KLK9Q2XQG4 91 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 SLC25A42Q86VD7 318 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 ZNF2Q9BSG1 426 aaPredicted RBP16.68■□□□□ 0.26
COL9A3-211ENST00000477612 NAA50Q9GZZ1 169 aaKnown RBP16.68■□□□□ 0.26
COL9A3-211ENST00000477612 SCPEP1Q9HB40 452 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 KLK9Q9UKQ9 250 aa16.68■□□□□ 0.26
COL9A3-211ENST00000477612 FAM223BA6NKX1 122 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 PMP2P02689 132 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 ZNF735P0CB33 412 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 ELK1P19419 428 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 RPL27AP46776 148 aaKnown RBP16.67■□□□□ 0.26
COL9A3-211ENST00000477612 HERV-K104P61576 105 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 ZNF45Q02386 682 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 CD69Q07108 199 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 TMEM17Q86X19 198 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 FAM223AQ8IWN6 122 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 OR5H2Q8NGV7 314 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 CD300LFQ8TDQ1 290 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 AKIP1Q9NQ31 210 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 ZNF257Q9Y2Q1 563 aa16.67■□□□□ 0.26
COL9A3-211ENST00000477612 A0A1B0GW64 132 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 NPIPB5A8MRT5 1133 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 SULT1C2O00338 296 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 HPGDSO60760 199 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 FGF2P09038 288 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 ALDH3B2P48448 385 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 OR4A47Q6IF82 309 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 OR6Q1Q8NGQ2 317 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 OR4C12Q96R67 309 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 ELOVL1Q9BW60 279 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 MRPS26Q9BYN8 205 aaKnown RBP16.66■□□□□ 0.26
COL9A3-211ENST00000477612 PLEKHA2Q9HB19 425 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 SLC2A9Q9NRM0 540 aa16.66■□□□□ 0.26
COL9A3-211ENST00000477612 ANKRD34BA5PLL1 514 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 HMX3A6NHT5 357 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 CRYGCP07315 174 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 NQO2P16083 231 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 RPL8P62917 257 aaKnown RBP16.65■□□□□ 0.26
COL9A3-211ENST00000477612 RHOGP84095 191 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 DEFA5Q01523 94 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 MZT2AQ6P582 158 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 SSX9Q7RTT3 188 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 OR6F1Q8NGZ6 308 aa16.65■□□□□ 0.26
COL9A3-211ENST00000477612 PGLYRP1O75594 196 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-211ENST00000477612 TRBV12-3P01733 135 aa16.64■□□□□ 0.25
COL9A3-211ENST00000477612 PRH1P02810 166 aa16.64■□□□□ 0.25
COL9A3-211ENST00000477612 SPNP16150 400 aa16.64■□□□□ 0.25
COL9A3-211ENST00000477612 ZNF182P17025 639 aaPredicted RBP16.64■□□□□ 0.25
COL9A3-211ENST00000477612 HRH1P35367 487 aa16.64■□□□□ 0.25
COL9A3-211ENST00000477612 CADM3Q8N126 398 aa16.64■□□□□ 0.25
COL9A3-211ENST00000477612 NECAP1Q8NC96 275 aa16.64■□□□□ 0.25
COL9A3-211ENST00000477612 AP3S1Q92572 193 aa16.64■□□□□ 0.25
COL9A3-211ENST00000477612 CGB1A6NKQ9 187 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 TPPPO94811 219 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 IGLV1-51P01701 117 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 HLA-GP17693 338 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 HLA-DMAP28067 261 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 ATP5G2Q06055 141 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 FAM209BQ5JX69 171 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 VAX1Q5SQQ9 334 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 AADACL3Q5VUY0 350 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 GPR107Q5VW38 600 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 IL34Q6ZMJ4 242 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 OR9G4Q8NGQ1 327 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 OR51H1Q8NH63 302 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 FXYD6Q9H0Q3 95 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 SIGLEC8Q9NYZ4 499 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 COMMD9Q9P000 198 aa16.63■□□□□ 0.25
COL9A3-211ENST00000477612 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.62■□□□□ 0.25
COL9A3-211ENST00000477612 UPK2O00526 184 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 NHLRC4P0CG21 123 aaPredicted RBP16.62■□□□□ 0.25
COL9A3-211ENST00000477612 GP9P14770 177 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 CTRB1P17538 263 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 F2RP25116 425 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 RCVRNP35243 200 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 CTRB2Q6GPI1 263 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 SNX29P2Q8IUI4 249 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 FANCD2OSQ96PS1 177 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 FYTTD1Q96QD9 318 aaKnown RBP16.62■□□□□ 0.25
COL9A3-211ENST00000477612 DMRT1Q9Y5R6 373 aa16.62■□□□□ 0.25
COL9A3-211ENST00000477612 GPR31O00270 319 aa16.61■□□□□ 0.25
COL9A3-211ENST00000477612 S1PR2O95136 353 aa16.61■□□□□ 0.25
COL9A3-211ENST00000477612 LY86O95711 162 aa16.61■□□□□ 0.25
COL9A3-211ENST00000477612 PSMB6P28072 239 aa16.61■□□□□ 0.25
COL9A3-211ENST00000477612 EXOSC2Q13868 293 aaKnown RBP16.61■□□□□ 0.25
COL9A3-211ENST00000477612 TATDN3Q17R31 274 aa16.61■□□□□ 0.25
COL9A3-211ENST00000477612 C11orf87Q6NUJ2 197 aa16.61■□□□□ 0.25
COL9A3-211ENST00000477612 LPCAT3Q6P1A2 487 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms