RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 C9orf16Q9BUW7 83 aa13.14□□□□□ -0.31
RNF220-212ENST00000475378 ZNF436Q9C0F3 470 aaPredicted RBP13.14□□□□□ -0.31
RNF220-212ENST00000475378 UFC1Q9Y3C8 167 aa13.14□□□□□ -0.31
RNF220-212ENST00000475378 IGLV11-55A0A075B6I3 123 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 TRBV7-1A0A0A6YYK4 115 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 IGLL5B9A064 214 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 RPL27AP46776 148 aaKnown RBP13.13□□□□□ -0.31
RNF220-212ENST00000475378 MFAP2P55001 183 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 MED22Q15528 200 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 ACSM3Q53FZ2 586 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 OR6M1Q8NGM8 313 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 CSTL1Q9H114 145 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 OR51E2Q9H255 320 aa13.13□□□□□ -0.31
RNF220-212ENST00000475378 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 DPPA5A6NC42 116 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 EFCAB10A6NFE3 127 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 PRSS29PA6NIE9 313 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 RTL8CO15255 209 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 CIB2O75838 187 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 MYOD1P15172 320 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 HIST1H1BP16401 226 aaKnown RBP13.12□□□□□ -0.31
RNF220-212ENST00000475378 RASSF2P50749 326 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 ST3GAL4Q11206 333 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 VKORC1L1Q8N0U8 176 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 OR11H2Q8NH07 326 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 OR5B3Q8NH48 314 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 KCNK7Q9Y2U2 307 aa13.12□□□□□ -0.31
RNF220-212ENST00000475378 RBM7Q9Y580 266 aaKnown RBP13.12□□□□□ -0.31
RNF220-212ENST00000475378 FCGR3BO75015 233 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 KBTBD11O94819 623 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 CDK1P06493 297 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 FCGR3AP08637 254 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 GPR183P32249 361 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 P2RY14Q15391 338 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 PUSL1Q8N0Z8 303 aaKnown RBP13.11□□□□□ -0.31
RNF220-212ENST00000475378 ZNF502Q8TBZ5 544 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 CD300LFQ8TDQ1 290 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 TMEM190Q8WZ59 177 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 CXorf58Q96LI9 332 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 GFI1Q99684 422 aa13.11□□□□□ -0.31
RNF220-212ENST00000475378 OR4C46A6NHA9 309 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 MPTX1A8MV57 137 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 DEFB4AO15263 64 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 DHFRP00374 187 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 WNT4P56705 351 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 ARFRP1Q13795 201 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 ZNF124Q15973 351 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 LAMTOR1Q6IAA8 161 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 H1FOOQ8IZA3 346 aaPredicted RBP13.1□□□□□ -0.31
RNF220-212ENST00000475378 TMEM167AQ8TBQ9 72 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 OR2A7Q96R45 310 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 DCUN1D5Q9BTE7 237 aa13.1□□□□□ -0.31
RNF220-212ENST00000475378 CGB1A6NKQ9 187 aa13.09□□□□□ -0.31
RNF220-212ENST00000475378 C11orf94C9JXX5 98 aa13.09□□□□□ -0.31
RNF220-212ENST00000475378 ADMP35318 185 aa13.09□□□□□ -0.31
RNF220-212ENST00000475378 MAS1LP35410 378 aa13.09□□□□□ -0.31
RNF220-212ENST00000475378 IRF3Q14653 427 aa13.09□□□□□ -0.31
RNF220-212ENST00000475378 SLC17A2O00624 439 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 REG1AP05451 166 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.32
RNF220-212ENST00000475378 OR2B11Q5JQS5 317 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 PLET1Q6UQ28 207 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 KCTD9Q7L273 389 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 MS4A15Q8N5U1 240 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 OR56B1Q8NGI3 324 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 VSTM2AQ8TAG5 236 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 MAFIPQ8WZ33 124 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 GINS4Q9BRT9 223 aa13.08□□□□□ -0.32
RNF220-212ENST00000475378 C6orf62Q9GZU0 229 aaPredicted RBP13.08□□□□□ -0.32
RNF220-212ENST00000475378 DAZ1Q9NQZ3 744 aaKnown RBP13.08□□□□□ -0.32
RNF220-212ENST00000475378 MYL12BO14950 172 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 TGOLN2O43493 480 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 ATP5HO75947 161 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 CTSDP07339 412 aaPredicted RBP13.07□□□□□ -0.32
RNF220-212ENST00000475378 UCHL1P09936 223 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 RPA2P15927 270 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 PSMD7P51665 324 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 HSD17B12Q53GQ0 312 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 ZNF645Q8N7E2 425 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 NANOGP1Q8N7R0 232 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
RNF220-212ENST00000475378 MRPS7Q9Y2R9 242 aaKnown RBP13.07□□□□□ -0.32
RNF220-212ENST00000475378 IGLV2-14P01704 120 aa13.06□□□□□ -0.32
RNF220-212ENST00000475378 DEFA4P12838 97 aa13.06□□□□□ -0.32
RNF220-212ENST00000475378 PTBP1P26599 531 aaKnown RBP eCLIP13.06□□□□□ -0.32
RNF220-212ENST00000475378 BRWD1-AS2P59051 145 aa13.06□□□□□ -0.32
RNF220-212ENST00000475378 PLA2G7Q13093 441 aa13.06□□□□□ -0.32
RNF220-212ENST00000475378 SMPD3Q9NY59 655 aaPredicted RBP13.06□□□□□ -0.32
RNF220-212ENST00000475378 PRELID3BQ9Y3B1 194 aa13.06□□□□□ -0.32
RNF220-212ENST00000475378 IGHV4-4A0A075B6R2 117 aa13.05□□□□□ -0.32
RNF220-212ENST00000475378 MRPS15P82914 257 aaKnown RBP13.05□□□□□ -0.32
RNF220-212ENST00000475378 SSX9Q7RTT3 188 aa13.05□□□□□ -0.32
RNF220-212ENST00000475378 Q8NAQ8 132 aa13.05□□□□□ -0.32
RNF220-212ENST00000475378 OR4A5Q8NH83 315 aa13.05□□□□□ -0.32
RNF220-212ENST00000475378 PLGRKTQ9HBL7 147 aa13.05□□□□□ -0.32
RNF220-212ENST00000475378 PLA2G2EQ9NZK7 142 aa13.05□□□□□ -0.32
RNF220-212ENST00000475378 RBMX2Q9Y388 322 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms