RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 HEATR5BQ9P2D3 2071 aa1.06□□□□□ -2.24
LTN1-204ENST00000475344 RALGAPA2Q2PPJ7 1873 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 EIF4G1Q04637 1599 aaKnown RBP1.05□□□□□ -2.24
LTN1-204ENST00000475344 DISC1C4P0D8 188 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 PFDN6O15212 129 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 CREBL2O60519 120 aaPredicted RBP1.05□□□□□ -2.24
LTN1-204ENST00000475344 APOEP02649 317 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 MAGEA12P43365 314 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 SLCO1A2P46721 670 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 HIST1H4AP62805 103 aaKnown RBP1.05□□□□□ -2.24
LTN1-204ENST00000475344 TPM4P67936 248 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 MLLT11Q13015 90 aaPredicted RBP1.05□□□□□ -2.24
LTN1-204ENST00000475344 BATFQ16520 125 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 LRRC75BQ2VPJ9 315 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 CST9Q5W186 159 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 C5orf46Q6UWT4 87 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 LRRC28Q86X40 367 aaPredicted RBP1.05□□□□□ -2.24
LTN1-204ENST00000475344 DYNAPQ8N1N2 210 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 RAB2BQ8WUD1 216 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 GNPNAT1Q96EK6 184 aaPredicted RBP1.05□□□□□ -2.24
LTN1-204ENST00000475344 TMA16Q96EY4 203 aaKnown RBP1.05□□□□□ -2.24
LTN1-204ENST00000475344 OR51I2Q9H344 312 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 MAP1LC3AQ9H492 121 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 AK3Q9UIJ7 227 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 ABCC11Q96J66 1382 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 BRWD1Q9NSI6 2320 aa1.05□□□□□ -2.24
LTN1-204ENST00000475344 IGHV1-18A0A0C4DH31 117 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 A8MUN3 132 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 CCR2P41597 374 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 REG1BP48304 166 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 POLR2GP62487 172 aaKnown RBP eCLIP1.04□□□□□ -2.24
LTN1-204ENST00000475344 SLC38A11Q08AI6 406 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 C1orf194Q5T5A4 169 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 RASSF6Q6ZTQ3 369 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 KTN1-AS1Q86SY8 53 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 SLC51BQ86UW2 128 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 COMMD7Q86VX2 200 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 SLC22A24Q8N4F4 322 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 TMEM161BQ8NDZ6 487 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 OR51T1Q8NGJ9 327 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 DDI1Q8WTU0 396 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 DRC3Q9H069 523 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 HRASLSQ9HDD0 168 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 FKBP14Q9NWM8 211 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 RSL24D1Q9UHA3 163 aaKnown RBP1.04□□□□□ -2.24
LTN1-204ENST00000475344 DKKL1Q9UK85 242 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 COQ4Q9Y3A0 265 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 KIF15Q9NS87 1388 aa1.04□□□□□ -2.24
LTN1-204ENST00000475344 TRAV7A0A075B6U4 112 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 IGHV1-69-2A0A0G2JMI3 117 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 EVPLLA8MZ36 301 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 H0Y980 276 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 H7C2G1 150 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 CXCR6O00574 342 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 COX7A2LO14548 114 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 OCM2P0CE71 109 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 MYL12AP19105 171 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 CCL1P22362 96 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 RPL12P30050 165 aaKnown RBP1.03□□□□□ -2.24
LTN1-204ENST00000475344 AKR1C3P42330 323 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 EVX1P49640 407 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 COTL1Q14019 142 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 ZNF705AQ6ZN79 300 aaPredicted RBP1.03□□□□□ -2.24
LTN1-204ENST00000475344 OR2T27Q8NH04 317 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 CXorf21Q9HAI6 301 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 GPR84Q9NQS5 396 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 PRELID1Q9Y255 219 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 RBM7Q9Y580 266 aaKnown RBP1.03□□□□□ -2.24
LTN1-204ENST00000475344 MAST2Q6P0Q8 1798 aa1.03□□□□□ -2.24
LTN1-204ENST00000475344 HMSDA8MTL9 139 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 M0QZ92 97 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 SLC16A4O15374 487 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 PGLYRP1O75594 196 aaPredicted RBP1.02□□□□□ -2.25
LTN1-204ENST00000475344 DEXIO95424 95 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 MSMBP08118 114 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 LGALS1P09382 135 aaKnown RBP1.02□□□□□ -2.25
LTN1-204ENST00000475344 RPS12P25398 132 aaKnown RBP1.02□□□□□ -2.25
LTN1-204ENST00000475344 MAGEA2P43356 314 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 RSU1Q15404 277 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 ACSM3Q53FZ2 586 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 CDKL4Q5MAI5 379 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 C9orf64Q5T6V5 341 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 OGFRL1Q5TC84 451 aaPredicted RBP1.02□□□□□ -2.25
LTN1-204ENST00000475344 C1orf195Q5TG92 126 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 ARFGEF3Q5TH69 2177 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 UMODL1-AS1Q8N2C9 162 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 OTUD6BQ8N6M0 293 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 SGMS2Q8NHU3 365 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 PIGXQ8TBF5 258 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 IMMP2LQ96T52 175 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 USE1Q9NZ43 259 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 ANAPC10Q9UM13 185 aa1.02□□□□□ -2.25
LTN1-204ENST00000475344 COL6A6A6NMZ7 2263 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 DIDO1Q9BTC0 2240 aaKnown RBP1.01□□□□□ -2.25
LTN1-204ENST00000475344 IGKV1D-43A0A0B4J1Z2 117 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 OR4C45A6NMZ5 311 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 C21orf140B9A014 251 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 ZNF737O75373 536 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 CIAO1O76071 339 aa1.01□□□□□ -2.25
LTN1-204ENST00000475344 TFPTP0C1Z6 253 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms