RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 HARBI1Q96MB7 349 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 DUX5Q96PT3 197 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 SLC25A33Q9BSK2 321 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 OR51J1Q9H342 316 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 FBXL15Q9H469 300 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 GPN1Q9HCN4 374 aaPredicted RBP7.96□□□□□ -1.14
COL8A1-206ENST00000474648 TPSG1Q9NRR2 321 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 VPREB3Q9UKI3 123 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 SIGLEC9Q9Y336 463 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 MARCH11A6NNE9 402 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 NCBP2LA6PVI3 153 aaKnown RBP7.95□□□□□ -1.14
COL8A1-206ENST00000474648 UPK2O00526 184 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 SLC25A17O43808 307 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 ADAP1O75689 374 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 OR2A4O95047 310 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 SPDEFO95238 335 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 OR9G9P0C7N8 305 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 CD33P20138 364 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 PJVKQ0ZLH3 352 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 MMDQ15546 238 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 IZUMO4Q1ZYL8 232 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 C5orf64Q2M2E5 130 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 NMSQ5H8A3 153 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 OR4A47Q6IF82 309 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 C5orf56Q8N8D9 126 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 COQ8AQ8NI60 647 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 TMEM167AQ8TBQ9 72 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 LSM10Q969L4 123 aaKnown RBP7.95□□□□□ -1.14
COL8A1-206ENST00000474648 OR2A7Q96R45 310 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 PHB2Q99623 299 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 AIFM2Q9BRQ8 373 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 TMEM140Q9NV12 185 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 BET1LQ9NYM9 111 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 C1RLQ9NZP8 487 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 METTL1Q9UBP6 276 aaKnown RBP7.95□□□□□ -1.14
COL8A1-206ENST00000474648 PITPNC1Q9UKF7 332 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 MMP24Q9Y5R2 645 aa7.95□□□□□ -1.14
COL8A1-206ENST00000474648 SETD2Q9BYW2 2564 aaPredicted RBP7.95□□□□□ -1.14
COL8A1-206ENST00000474648 NF1P21359 2839 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 DUXBA0A1W2PPF3 345 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 BTBD17A6NE02 478 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 SH2D7A6NKC9 451 aaPredicted RBP7.94□□□□□ -1.14
COL8A1-206ENST00000474648 FGF16O43320 207 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 GPR137BO60478 399 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 CREBL2O60519 120 aaPredicted RBP7.94□□□□□ -1.14
COL8A1-206ENST00000474648 ATG12O94817 140 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 HOXB5P09067 269 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 HLA-GP17693 338 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 VDAC1P21796 283 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 BLCAPP62952 87 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 UBA52P62987 128 aaKnown RBP7.94□□□□□ -1.14
COL8A1-206ENST00000474648 SSBP2P81877 361 aaPredicted RBP7.94□□□□□ -1.14
COL8A1-206ENST00000474648 PRSS8Q16651 343 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 VMA21Q3ZAQ7 101 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 SAMD5Q5TGI4 173 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 GGNBP1Q5YKI7 109 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 Q6ZS46 218 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 C16orf82Q7Z2V1 217 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 UXS1Q8NBZ7 420 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 DMBX1Q8NFW5 382 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 OR4A5Q8NH83 315 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 MOB4Q9Y3A3 225 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 JMJD1CQ15652 2540 aa7.94□□□□□ -1.14
COL8A1-206ENST00000474648 CUBNO60494 3623 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 LINC01548A6NM66 108 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 MPTX1A8MV57 137 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 KBTBD11O94819 623 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 RNASE1P07998 156 aaKnown RBP7.93□□□□□ -1.14
COL8A1-206ENST00000474648 MYOD1P15172 320 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 ERVK-16P61578 105 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 H2BFWTQ7Z2G1 175 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 PPP1R27Q86WC6 154 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 FAM219AQ8IW50 185 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 VSTM2AQ8TAG5 236 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 RRNAD1Q96FB5 475 aaKnown RBP7.93□□□□□ -1.14
COL8A1-206ENST00000474648 CLCC1Q96S66 551 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 RASL11BQ9BPW5 248 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 RANBP3Q9H6Z4 567 aaPredicted RBP7.93□□□□□ -1.14
COL8A1-206ENST00000474648 ZNF430Q9H8G1 570 aaPredicted RBP7.93□□□□□ -1.14
COL8A1-206ENST00000474648 RAB18Q9NP72 206 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 KIAA1456Q9P272 454 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 NSG2Q9Y328 171 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 TMED3Q9Y3Q3 217 aa7.93□□□□□ -1.14
COL8A1-206ENST00000474648 IGHV7-81A0A0B4J1V7 117 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 PIGBOS1A0A0B4J2F0 54 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 A0A1B0GU03 582 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 A0A1B0GVG6 124 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 E7EUB6 86 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 M0QZK8 103 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 TCF21O43680 179 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 PITX3O75364 302 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 HLA-DRB1P01911 266 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 SULT1A3P0DMM9 295 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 SULT1A4P0DMN0 295 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 EGR2P11161 476 aaPredicted RBP7.92□□□□□ -1.14
COL8A1-206ENST00000474648 AKR1C2P52895 323 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 CX3CL1P78423 397 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 SRSF2Q01130 221 aaKnown RBP7.92□□□□□ -1.14
COL8A1-206ENST00000474648 FCN2Q15485 313 aa7.92□□□□□ -1.14
COL8A1-206ENST00000474648 AARDQ4LEZ3 155 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms