RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SULT1C2O00338 296 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 ACTL6BO94805 426 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 PPYP01298 95 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 REG1AP05451 166 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 SCAND1P57086 179 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 FXYD4P59646 89 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 ATP5G2Q06055 141 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 C15orf32Q32M92 178 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 TMEM167AQ8TBQ9 72 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 FANCD2OSQ96PS1 177 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 SPIN2AQ99865 258 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 SPIN2BQ9BPZ2 258 aa12.65□□□□□ -0.38
USP40-212ENST00000473191 DYNC2H1Q8NCM8 4307 aaKnown RBP12.64□□□□□ -0.39
USP40-212ENST00000473191 FAM223BA6NKX1 122 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 SLC22A5O76082 557 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 NDUFB8O95169 186 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 ZNF735P0CB33 412 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 RPS19P39019 145 aaKnown RBP12.64□□□□□ -0.39
USP40-212ENST00000473191 RPL27AP46776 148 aaKnown RBP12.64□□□□□ -0.39
USP40-212ENST00000473191 MECP2P51608 486 aaKnown RBP12.64□□□□□ -0.39
USP40-212ENST00000473191 ZNF66Q6ZN08 573 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 ZNF818PQ6ZRF7 136 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 FAM223AQ8IWN6 122 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 YIPF6Q96EC8 236 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 TM2D3Q9BRN9 247 aa12.64□□□□□ -0.39
USP40-212ENST00000473191 GAR1Q9NY12 217 aaKnown RBP12.64□□□□□ -0.39
USP40-212ENST00000473191 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
USP40-212ENST00000473191 OR4A47Q6IF82 309 aa12.63□□□□□ -0.39
USP40-212ENST00000473191 SPAG16Q8N0X2 631 aa12.63□□□□□ -0.39
USP40-212ENST00000473191 CCDC140Q96MF4 163 aa12.63□□□□□ -0.39
USP40-212ENST00000473191 SLC5A7Q9GZV3 580 aa12.63□□□□□ -0.39
USP40-212ENST00000473191 FBXL7Q9UJT9 491 aa12.63□□□□□ -0.39
USP40-212ENST00000473191 NPIPB5A8MRT5 1133 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 A8MZ25 164 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 CREBL2O60519 120 aaPredicted RBP12.62□□□□□ -0.39
USP40-212ENST00000473191 OR2C1O95371 312 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 RPA2P15927 270 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 RFX2P48378 723 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 TIMM50Q3ZCQ8 353 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 CASC10Q5T4H9 136 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 TMEM17Q86X19 198 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 NECAP1Q8NC96 275 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 MUC7Q8TAX7 377 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 DIABLOQ9NR28 239 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 SLC2A9Q9NRM0 540 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 ZNF257Q9Y2Q1 563 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 STARD9Q9P2P6 4700 aa12.62□□□□□ -0.39
USP40-212ENST00000473191 RYR2Q92736 4967 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 A0A0A6YYH2 397 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 A6NJ64 397 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 XRCC3O43542 346 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 AIREO43918 545 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 CRYGCP07315 174 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 CTRB1P17538 263 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 PSMB6P28072 239 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 CD300EQ496F6 205 aaPredicted RBP12.61□□□□□ -0.39
USP40-212ENST00000473191 CTRB2Q6GPI1 263 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 CLEC19AQ6UXS0 136 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 OR5AP2Q8NGF4 316 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 OR51H1Q8NH63 302 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 VSTM2AQ8TAG5 236 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 CACNG8Q8WXS5 425 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 WFDC10AQ9H1F0 79 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 SIGLEC8Q9NYZ4 499 aa12.61□□□□□ -0.39
USP40-212ENST00000473191 MFSD2BA6NFX1 497 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 H0Y980 276 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 C3orf84H3BNL1 204 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 S1PR2O95136 353 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 PMP2P02689 132 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 CD7P09564 240 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 HLA-GP17693 338 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 GNRHRP30968 328 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 RPL8P62917 257 aaKnown RBP12.6□□□□□ -0.39
USP40-212ENST00000473191 HAGHQ16775 308 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 TATDN3Q17R31 274 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 SGPP2Q8IWX5 399 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 GIMAP1Q8WWP7 306 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 ZMAT4Q9H898 229 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 PLEKHA3Q9HB20 300 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 HRASLSQ9HDD0 168 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 BET1LQ9NYM9 111 aa12.6□□□□□ -0.39
USP40-212ENST00000473191 DPPA5A6NC42 116 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 HRASP01112 189 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 EIF4EP06730 217 aaKnown RBP12.59□□□□□ -0.39
USP40-212ENST00000473191 MAS1LP35410 378 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 TAS2R20P59543 309 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 OR2B8PP59922 312 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 MSMO1Q15800 293 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 UBE2NLQ5JXB2 153 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 Q8N402 240 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 SAMD12Q8N8I0 201 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 TSPAN14Q8NG11 270 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 OR10W1Q8NGF6 305 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 RETNQ9HD89 108 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 EHFQ9NZC4 300 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 PEMTQ9UBM1 199 aa12.59□□□□□ -0.39
USP40-212ENST00000473191 ANAPC10Q9UM13 185 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms