RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 FAM25CB3EWG5 89 aa13.15□□□□□ -0.3
COMMD3-210ENST00000472610 FAM25GB3EWG6 89 aa13.15□□□□□ -0.3
COMMD3-210ENST00000472610 HPRT1P00492 218 aa13.15□□□□□ -0.3
COMMD3-210ENST00000472610 GNRHRP30968 328 aa13.15□□□□□ -0.3
COMMD3-210ENST00000472610 SLURP1P55000 103 aa13.15□□□□□ -0.3
COMMD3-210ENST00000472610 SNX29P2Q8IUI4 249 aa13.15□□□□□ -0.3
COMMD3-210ENST00000472610 LYSMD2Q8IV50 215 aa13.15□□□□□ -0.3
COMMD3-210ENST00000472610 ADAD2Q8NCV1 583 aaKnown RBP13.15□□□□□ -0.3
COMMD3-210ENST00000472610 OR4A5Q8NH83 315 aa13.15□□□□□ -0.3
COMMD3-210ENST00000472610 TPPPO94811 219 aa13.14□□□□□ -0.31
COMMD3-210ENST00000472610 APELAP0DMC3 54 aa13.14□□□□□ -0.31
COMMD3-210ENST00000472610 ZP3P21754 424 aa13.14□□□□□ -0.31
COMMD3-210ENST00000472610 RCVRNP35243 200 aa13.14□□□□□ -0.31
COMMD3-210ENST00000472610 ECI1P42126 302 aa13.14□□□□□ -0.31
COMMD3-210ENST00000472610 TAS2R31P59538 309 aa13.14□□□□□ -0.31
COMMD3-210ENST00000472610 TTC9CQ8N5M4 171 aa13.14□□□□□ -0.31
COMMD3-210ENST00000472610 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
COMMD3-210ENST00000472610 PRKDCP78527 4128 aaKnown RBP13.14□□□□□ -0.31
COMMD3-210ENST00000472610 NQO2P16083 231 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 HLA-DMAP28067 261 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 HRH1P35367 487 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 RPL27AP46776 148 aaKnown RBP13.13□□□□□ -0.31
COMMD3-210ENST00000472610 TSPAN5P62079 268 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
COMMD3-210ENST00000472610 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 LPCAT3Q6P1A2 487 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 ZNF343Q6P1L6 599 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 SSX9Q7RTT3 188 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 CMTM1Q8IZ96 169 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 OR51H1Q8NH63 302 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 C15orf40Q8WUR7 153 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 PLEKHA2Q9HB19 425 aa13.13□□□□□ -0.31
COMMD3-210ENST00000472610 FAM223BA6NKX1 122 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 SAP30O75446 220 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 POU2AF1Q16633 256 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 C10orf55Q5SWW7 151 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 OR4A47Q6IF82 309 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 FAM223AQ8IWN6 122 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 ELOVL1Q9BW60 279 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 HRASLSQ9HDD0 168 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 PEF1Q9UBV8 284 aaKnown RBP13.12□□□□□ -0.31
COMMD3-210ENST00000472610 ZNF256Q9Y2P7 627 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-210ENST00000472610 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
COMMD3-210ENST00000472610 TRBV9A0A0B4J1U6 114 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 ANKRD34BA5PLL1 514 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 DPPA5A6NC42 116 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 GPR31O00270 319 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 PGLYRP1O75594 196 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-210ENST00000472610 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 F2RP25116 425 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 S100GP29377 79 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 RHOGP84095 191 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 FAM209BQ5JX69 171 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 RAB2BQ8WUD1 216 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 FYTTD1Q96QD9 318 aaKnown RBP13.11□□□□□ -0.31
COMMD3-210ENST00000472610 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 BCL7BQ9BQE9 202 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 SLC2A9Q9NRM0 540 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 COMMD9Q9P000 198 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 EXTL2Q9UBQ6 330 aa13.11□□□□□ -0.31
COMMD3-210ENST00000472610 HMX3A6NHT5 357 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 NPIPB5A8MRT5 1133 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 DHFRP00374 187 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 IL6RP08887 468 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-210ENST00000472610 FGF2P09038 288 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 HLA-GP17693 338 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 ATP5G2Q06055 141 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 CLVS1Q8IUQ0 354 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-210ENST00000472610 NECAP1Q8NC96 275 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 DMBX1Q8NFW5 382 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 OR6Q1Q8NGQ2 317 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 FXYD6Q9H0Q3 95 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 AKIP1Q9NQ31 210 aa13.1□□□□□ -0.31
COMMD3-210ENST00000472610 UPK2O00526 184 aa13.09□□□□□ -0.31
COMMD3-210ENST00000472610 RLN1P04808 185 aa13.09□□□□□ -0.31
COMMD3-210ENST00000472610 TMBIM6P55061 237 aa13.09□□□□□ -0.31
COMMD3-210ENST00000472610 UCP3P55916 312 aa13.09□□□□□ -0.31
COMMD3-210ENST00000472610 ERVK-16P61578 105 aa13.09□□□□□ -0.31
COMMD3-210ENST00000472610 KLF5Q13887 457 aaPredicted RBP13.09□□□□□ -0.31
COMMD3-210ENST00000472610 VAX1Q5SQQ9 334 aa13.09□□□□□ -0.31
COMMD3-210ENST00000472610 DGCR14Q96DF8 476 aaKnown RBP13.09□□□□□ -0.31
COMMD3-210ENST00000472610 PRR25Q96S07 402 aa13.09□□□□□ -0.31
COMMD3-210ENST00000472610 COMMD5Q9GZQ3 224 aa13.09□□□□□ -0.31
COMMD3-210ENST00000472610 E7EUB6 86 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 RGS5O15539 181 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 S1PR2O95136 353 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 PRH1P02810 166 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 IFNA6P05013 189 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 CRYGCP07315 174 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 RPL5P46777 297 aaKnown RBP13.08□□□□□ -0.32
COMMD3-210ENST00000472610 ZNF45Q02386 682 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 SPCS2Q15005 226 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 CADM3Q8N126 398 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 FCAMRQ8WWV6 532 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 B9D2Q9BPU9 175 aa13.08□□□□□ -0.32
COMMD3-210ENST00000472610 SRSF8Q9BRL6 282 aaKnown RBP13.08□□□□□ -0.32
COMMD3-210ENST00000472610 RSRP1Q9BUV0 290 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms