RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 IGKV1-27A0A075B6S5 117 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 TRAV36DV7A0A075B6V5 113 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 A0A087WUJ7 227 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 A0A0B4J2E0 115 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 A0A0G2JMP0 313 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 A0A0X1KG70 313 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 A0A1B0GWA3 101 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 A0A1B0GX12 115 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CENPBD1B2RD01 187 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 H3BSA7 217 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CLDN34H7C241 214 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 GABRPO00591 440 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 RFXANKO14593 260 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 OR7C2O60412 319 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 UBL3O95164 117 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CPSF4O95639 269 aaKnown RBP2.24□□□□□ -2.05
HDAC9-221ENST00000471887 KRT75O95678 551 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 C1QCP02747 245 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 IGLV7-43P04211 117 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 IL6P05231 212 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 PFN1P07737 140 aaKnown RBP2.24□□□□□ -2.05
HDAC9-221ENST00000471887 PGA5P0DJD9 388 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 S100A3P33764 101 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CDKN2CP42773 168 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 RPL14P50914 215 aaKnown RBP2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CMC4P56277 68 aaPredicted RBP2.24□□□□□ -2.05
HDAC9-221ENST00000471887 RGS8P57771 180 aaPredicted RBP2.24□□□□□ -2.05
HDAC9-221ENST00000471887 DSTNP60981 165 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 COPZ1P61923 177 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 UBA52P62987 128 aaKnown RBP2.24□□□□□ -2.05
HDAC9-221ENST00000471887 ACTG1P63261 375 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 BNIP2Q12982 314 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 FADDQ13158 208 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CEACAM16Q2WEN9 425 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CARD17Q5XLA6 110 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 ZCCHC24Q8N2G6 241 aaKnown RBP2.24□□□□□ -2.05
HDAC9-221ENST00000471887 ZDHHC22Q8N966 263 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 OR4M2Q8NGB6 313 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 AGR3Q8TD06 166 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 YIPF5Q969M3 257 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 KCNS1Q96KK3 526 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 TEX37Q96LM6 180 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 PANX1Q96RD7 426 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 C20orf27Q9GZN8 174 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 ARMC7Q9H6L4 198 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 LINC00574Q9H8X3 128 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 TPT1P8Q9HAU6 139 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 BEX1Q9HBH7 125 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CRLF2Q9HC73 371 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 CLN6Q9NWW5 311 aa2.24□□□□□ -2.05
HDAC9-221ENST00000471887 TENM1Q9UKZ4 2725 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 PRORSD1PA6NEY8 169 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 SMIM23A6NLE4 172 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 TRPC5OSA6NMA1 111 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 CLDN25C9JDP6 229 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 LYNX1G3V0Z9 82 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 PLPP3O14495 311 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 ERLIN1O75477 346 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 OR2F2O95006 317 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 FSTL3O95633 263 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 RAB36O95755 333 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 IGF2P01344 180 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 HLA-HP01893 362 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 MMP7P09237 267 aaPredicted RBP2.23□□□□□ -2.05
HDAC9-221ENST00000471887 PGA4P0DJD7 388 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 PGA3P0DJD8 388 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 LYNX1P0DP58 116 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 IDO1P14902 403 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 PRTN3P24158 256 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 GRPRP30550 384 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 RPS5P46782 204 aaKnown RBP2.23□□□□□ -2.05
HDAC9-221ENST00000471887 SLC18A1P54219 525 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 KLF3P57682 345 aaPredicted RBP2.23□□□□□ -2.05
HDAC9-221ENST00000471887 C1DQ13901 141 aaKnown RBP2.23□□□□□ -2.05
HDAC9-221ENST00000471887 MOGQ16653 247 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 HIST3H3Q16695 136 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 TRMT5Q32P41 509 aaKnown RBP2.23□□□□□ -2.05
HDAC9-221ENST00000471887 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 GCSAMLQ5JQS6 135 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 C10orf128Q5T292 105 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 ULK3Q6PHR2 472 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 TBPL2Q6SJ96 375 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 TMPRSS11AQ6ZMR5 421 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 ADM2Q7Z4H4 148 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 COMTD1Q86VU5 262 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 C1orf174Q8IYL3 243 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 C3orf56Q8N813 242 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 DEFB108BQ8NET1 73 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 OR5J2Q8NH18 312 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 GTF2H4Q92759 462 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 POP5Q969H6 163 aaKnown RBP2.23□□□□□ -2.05
HDAC9-221ENST00000471887 C18orf15Q96N68 181 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 OR52E6Q96RD3 313 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 ZNF426Q9BUY5 554 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 BCL2L14Q9BZR8 327 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 SLC19A3Q9BZV2 496 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 CACYBPQ9HB71 228 aaKnown RBP2.23□□□□□ -2.05
HDAC9-221ENST00000471887 TMEM38BQ9NVV0 291 aa2.23□□□□□ -2.05
HDAC9-221ENST00000471887 GLTPQ9NZD2 209 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms