RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 ZFP30Q9Y2G7 519 aa12.1□□□□□ -0.47
HDAC7-219ENST00000470668 SIP14410 1827 aa12.1□□□□□ -0.47
HDAC7-219ENST00000470668 MTCL1Q9Y4B5 1905 aaKnown RBP12.1□□□□□ -0.47
HDAC7-219ENST00000470668 PPIAL4DF5H284 164 aa12.1□□□□□ -0.47
HDAC7-219ENST00000470668 LINC00869P0C866 280 aa12.1□□□□□ -0.47
HDAC7-219ENST00000470668 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-219ENST00000470668 GCSAMLQ5JQS6 135 aa12.1□□□□□ -0.47
HDAC7-219ENST00000470668 TMEM116Q8NCL8 245 aa12.1□□□□□ -0.47
HDAC7-219ENST00000470668 DIRC2Q96SL1 478 aa12.1□□□□□ -0.47
HDAC7-219ENST00000470668 KLF13Q9Y2Y9 288 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-219ENST00000470668 IGHMP01871 453 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 IFI6P09912 130 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 TSPAN7P41732 249 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 FER1L6-AS2Q96M78 137 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 MEGF9Q9H1U4 602 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 TMEM242Q9NWH2 141 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 CHD3Q12873 2000 aaKnown RBP12.09□□□□□ -0.47
HDAC7-219ENST00000470668 H3BVH4 76 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 SLC25A40Q8TBP6 338 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 RNASE7Q9H1E1 156 aaKnown RBP12.09□□□□□ -0.47
HDAC7-219ENST00000470668 PGPA6NDG6 321 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 COX5BP10606 129 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 GZMHP20718 246 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 KCNMB1Q16558 191 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 LCN12Q6JVE5 192 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 TWSG1Q9GZX9 223 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 WDR54Q9H977 334 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 AMMECR1Q9Y4X0 333 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-219ENST00000470668 TMEM56-RWDD3S4R434 201 aa12.09□□□□□ -0.47
HDAC7-219ENST00000470668 MAJINQ3KP22 176 aa12.08□□□□□ -0.47
HDAC7-219ENST00000470668 PRR31Q5SQ13 230 aa12.08□□□□□ -0.47
HDAC7-219ENST00000470668 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.47
HDAC7-219ENST00000470668 PRNTQ86SH4 94 aa12.08□□□□□ -0.47
HDAC7-219ENST00000470668 OR2M7Q8NG81 312 aa12.08□□□□□ -0.47
HDAC7-219ENST00000470668 OCC1Q8TAD7 63 aa12.08□□□□□ -0.47
HDAC7-219ENST00000470668 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
HDAC7-219ENST00000470668 EPHA8P29322 1005 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-219ENST00000470668 RPP25LQ8N5L8 163 aaKnown RBP12.08□□□□□ -0.48
HDAC7-219ENST00000470668 ARRDC1-AS1Q9H2J1 176 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 PI4KAP42356 2102 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 COL6A6A6NMZ7 2263 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 REG1BP48304 166 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 UNQ6494/PRO21346Q6UXR6 183 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 FAM131CQ96AQ9 280 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 COL25A1Q9BXS0 654 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-219ENST00000470668 GAL3ST2Q9H3Q3 398 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 SRSF9Q13242 221 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC7-219ENST00000470668 SPSB3Q6PJ21 355 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 ZNF841Q6ZN19 808 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 DPF1Q92782 380 aa12.08□□□□□ -0.48
HDAC7-219ENST00000470668 CD40P25942 277 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 ZNF83P51522 516 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 TMEM177Q53S58 311 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 STPG3Q8N7X2 389 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 NUDT11Q96G61 164 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 GUCD1Q96NT3 240 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 NAA38Q9BRA0 125 aaKnown RBP12.07□□□□□ -0.48
HDAC7-219ENST00000470668 DERL1Q9BUN8 251 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 IGHV3OR15-7A0A075B7D8 119 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 TRBV9A0A0B4J1U6 114 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 C5orf63A6NC05 138 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 S100A4P26447 101 aaKnown RBP12.07□□□□□ -0.48
HDAC7-219ENST00000470668 GNB2P62879 340 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 HARBI1Q96MB7 349 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 NABP2Q9BQ15 211 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 UFC1Q9Y3C8 167 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 LOXL2Q9Y4K0 774 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 HILPDAQ9Y5L2 63 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 CACNA1BQ00975 2339 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 hADV38S2A0JD32 116 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 CLDN14O95500 239 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 ZNF658BQ4V348 819 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A2PQ658T7 463 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 ZNF645Q8N7E2 425 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 WNT5BQ9H1J7 359 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 ZNF430Q9H8G1 570 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-219ENST00000470668 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
HDAC7-219ENST00000470668 LOC107984156A0A0G2JMH3 177 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A10PA6NDY2 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A18PA6NE21 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A16PA6NEW6 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A20PA6NIJ5 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A8PA6NJQ4 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A7PA6NKC0 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A22PA8MWA6 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A12PA8MX19 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A5PA8MXJ8 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A23PA8MXZ1 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A15PP0C7V4 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A13PP0C7W8 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A14PP0C7W9 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FAM90A24PP0C7X0 464 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 ARL17AQ8IVW1 177 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 SSBP4Q9BWG4 385 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-219ENST00000470668 FNDC4Q9H6D8 234 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-219ENST00000470668 TCF19Q9Y242 345 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
HDAC7-219ENST00000470668 TRGV5A0A0B4J1U4 118 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms