RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TAS2R46P59540 309 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 HERV-K104P61576 105 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 DEFA5Q01523 94 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 KLF5Q13887 457 aaPredicted RBP13.12□□□□□ -0.31
SSBP1-207ENST00000468267 CTF1Q16619 201 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 TMEM17Q86X19 198 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 LYSMD2Q8IV50 215 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 SPAG16Q8N0X2 631 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 AIFM2Q9BRQ8 373 aa13.12□□□□□ -0.31
SSBP1-207ENST00000468267 PEF1Q9UBV8 284 aaKnown RBP13.12□□□□□ -0.31
SSBP1-207ENST00000468267 STAB2Q8WWQ8 2551 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 TRBV9A0A0B4J1U6 114 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 TEX22C9J3V5 150 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
SSBP1-207ENST00000468267 GNRHRP30968 328 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 RHOGP84095 191 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 ZNF45Q02386 682 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 CATR1Q13166 79 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 SSX9Q7RTT3 188 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 SLC25A42Q86VD7 318 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 OR5H2Q8NGV7 314 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 GPX8Q8TED1 209 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 BORCS5Q969J3 196 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 MOB3AQ96BX8 217 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 OR4C12Q96R67 309 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 ZNF2Q9BSG1 426 aaPredicted RBP13.11□□□□□ -0.31
SSBP1-207ENST00000468267 ELOVL1Q9BW60 279 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
SSBP1-207ENST00000468267 AKIP1Q9NQ31 210 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 ADAM30Q9UKF2 790 aa13.11□□□□□ -0.31
SSBP1-207ENST00000468267 HMX3A6NHT5 357 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 FAM223BA6NKX1 122 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 E7EUB6 86 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 HPGDSO60760 199 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 GABARAPO95166 117 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 LY86O95711 162 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 PRH1P02810 166 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 ZNF735P0CB33 412 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 ELK1P19419 428 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 RPL27AP46776 148 aaKnown RBP13.1□□□□□ -0.31
SSBP1-207ENST00000468267 FAM223AQ8IWN6 122 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 OR6Q1Q8NGQ2 317 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 OR4A5Q8NH83 315 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 CD300LFQ8TDQ1 290 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 SCPEP1Q9HB40 452 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 BET1LQ9NYM9 111 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 ZNF257Q9Y2Q1 563 aa13.1□□□□□ -0.31
SSBP1-207ENST00000468267 A0A1B0GW64 132 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 HPRT1P00492 218 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 TRBV12-3P01733 135 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 SPNP16150 400 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 TAS2R31P59538 309 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 RPL8P62917 257 aaKnown RBP13.09□□□□□ -0.31
SSBP1-207ENST00000468267 ATP5G2Q06055 141 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 POU2AF1Q16633 256 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 AADACL3Q5VUY0 350 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 OR4A47Q6IF82 309 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 C11orf87Q6NUJ2 197 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 OR51H1Q8NH63 302 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 FYTTD1Q96QD9 318 aaKnown RBP13.09□□□□□ -0.31
SSBP1-207ENST00000468267 SLC2A9Q9NRM0 540 aa13.09□□□□□ -0.31
SSBP1-207ENST00000468267 NPIPB5A8MRT5 1133 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 NQO2P16083 231 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 HLA-GP17693 338 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 HLA-DMAP28067 261 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 HRH1P35367 487 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 VAX1Q5SQQ9 334 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 GPR107Q5VW38 600 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 MZT2AQ6P582 158 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 OR6F1Q8NGZ6 308 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 MRPS26Q9BYN8 205 aaKnown RBP13.08□□□□□ -0.32
SSBP1-207ENST00000468267 PLEKHA2Q9HB19 425 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 HRASLSQ9HDD0 168 aa13.08□□□□□ -0.32
SSBP1-207ENST00000468267 DPPA5A6NC42 116 aa13.07□□□□□ -0.32
SSBP1-207ENST00000468267 PGLYRP1O75594 196 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-207ENST00000468267 MYOD1P15172 320 aa13.07□□□□□ -0.32
SSBP1-207ENST00000468267 ZNF182P17025 639 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-207ENST00000468267 ALDH3B2P48448 385 aa13.07□□□□□ -0.32
SSBP1-207ENST00000468267 SYNJ2BPP57105 145 aa13.07□□□□□ -0.32
SSBP1-207ENST00000468267 EXOSC2Q13868 293 aaKnown RBP13.07□□□□□ -0.32
SSBP1-207ENST00000468267 IL34Q6ZMJ4 242 aa13.07□□□□□ -0.32
SSBP1-207ENST00000468267 OR9G4Q8NGQ1 327 aa13.07□□□□□ -0.32
SSBP1-207ENST00000468267 AP3S1Q92572 193 aa13.07□□□□□ -0.32
SSBP1-207ENST00000468267 FXYD6Q9H0Q3 95 aa13.07□□□□□ -0.32
SSBP1-207ENST00000468267 HUWE1Q7Z6Z7 4374 aaKnown RBP13.06□□□□□ -0.32
SSBP1-207ENST00000468267 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.06□□□□□ -0.32
SSBP1-207ENST00000468267 TRAV3A0A0B4J244 114 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 UPK2O00526 184 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 OR2J3O76001 311 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 S1PR2O95136 353 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 IGLV1-51P01701 117 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 CRYGCP07315 174 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 NHLRC4P0CG21 123 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-207ENST00000468267 GP9P14770 177 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 AREGP15514 252 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 F2RP25116 425 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 PSMB6P28072 239 aa13.06□□□□□ -0.32
SSBP1-207ENST00000468267 RCVRNP35243 200 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms