RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SSR3Q9UNL2 185 aa18.52■□□□□ 0.56
PTCH1-210ENST00000468211 ZNF785A8K8V0 405 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 MYOD1P15172 320 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 SDC2P34741 201 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 MXD1Q05195 221 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 OR4S2Q8NH73 311 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 TMEM167AQ8TBQ9 72 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 ISOC1Q96CN7 298 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 SLC25A38Q96DW6 304 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 OR2A7Q96R45 310 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 TUBA4BQ9H853 241 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 PLEKHA3Q9HB20 300 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 ZNF257Q9Y2Q1 563 aa18.51■□□□□ 0.55
PTCH1-210ENST00000468211 GVQW1Q8N7I0 195 aa18.5■□□□□ 0.55
PTCH1-210ENST00000468211 FCGR1BQ92637 280 aa18.5■□□□□ 0.55
PTCH1-210ENST00000468211 FYTTD1Q96QD9 318 aaKnown RBP18.5■□□□□ 0.55
PTCH1-210ENST00000468211 RETNQ9HD89 108 aa18.5■□□□□ 0.55
PTCH1-210ENST00000468211 FBXL7Q9UJT9 491 aa18.5■□□□□ 0.55
PTCH1-210ENST00000468211 S4R3C0 116 aa18.5■□□□□ 0.55
PTCH1-210ENST00000468211 AIREO43918 545 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 SCGNO76038 276 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 NDUFB8O95169 186 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 OR2C1O95371 312 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 IGHV3-23P01764 117 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 AREGP15514 252 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 RPL27AP46776 148 aaKnown RBP18.49■□□□□ 0.55
PTCH1-210ENST00000468211 LINC00322Q6ZN03 302 aaPredicted RBP18.49■□□□□ 0.55
PTCH1-210ENST00000468211 SSX9Q7RTT3 188 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 SLC25A42Q86VD7 318 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 OR2K2Q8NGT1 345 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 FANCD2OSQ96PS1 177 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 CCL28Q9NRJ3 127 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 SELENOKQ9Y6D0 94 aa18.49■□□□□ 0.55
PTCH1-210ENST00000468211 TRAV18A0A075B6X5 111 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 LCE6AA0A183 80 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 NPIPB5A8MRT5 1133 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 TNFSF12O43508 249 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 ATP6V1G2O95670 118 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 CD7P09564 240 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 ZNF735P0CB33 412 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 CD81P60033 236 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 DEFB114Q30KQ6 69 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 BEST4Q8NFU0 473 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 KCTD12Q96CX2 325 aaKnown RBP18.48■□□□□ 0.55
PTCH1-210ENST00000468211 CCDC140Q96MF4 163 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 WFDC10AQ9H1F0 79 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 SLC2A9Q9NRM0 540 aa18.48■□□□□ 0.55
PTCH1-210ENST00000468211 C2orf70A6NJV1 201 aa18.47■□□□□ 0.55
PTCH1-210ENST00000468211 CGB1A6NKQ9 187 aa18.47■□□□□ 0.55
PTCH1-210ENST00000468211 FCER2P06734 321 aa18.47■□□□□ 0.55
PTCH1-210ENST00000468211 FCGR2CP31995 323 aa18.47■□□□□ 0.55
PTCH1-210ENST00000468211 ZNF66Q6ZN08 573 aa18.47■□□□□ 0.55
PTCH1-210ENST00000468211 VSTM2AQ8TAG5 236 aa18.47■□□□□ 0.55
PTCH1-210ENST00000468211 SECTM1Q8WVN6 248 aa18.47■□□□□ 0.55
PTCH1-210ENST00000468211 NEURL2Q9BR09 285 aa18.47■□□□□ 0.55
PTCH1-210ENST00000468211 DNAH1Q9P2D7 4330 aa18.46■□□□□ 0.55
PTCH1-210ENST00000468211 GGCTO75223 188 aaKnown RBP18.46■□□□□ 0.55
PTCH1-210ENST00000468211 FOLR2P14207 255 aa18.46■□□□□ 0.55
PTCH1-210ENST00000468211 MAS1LP35410 378 aa18.46■□□□□ 0.55
PTCH1-210ENST00000468211 ZNF773Q6PK81 442 aa18.46■□□□□ 0.55
PTCH1-210ENST00000468211 DYNLRB2Q8TF09 96 aa18.46■□□□□ 0.55
PTCH1-210ENST00000468211 DPPA5A6NC42 116 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 REG1AP05451 166 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 CRYGCP07315 174 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 PSMB6P28072 239 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 KIR2DS2P43631 304 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 ARPC4P59998 168 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 IDNKQ5T6J7 187 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 CLEC19AQ6UXS0 136 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 HOGA1Q86XE5 327 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 DEFB125Q8N687 156 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 OR13F1Q8NGS4 319 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 CACNG8Q8WXS5 425 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 FAM110AQ9BQ89 295 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 HIPK2Q9H2X6 1198 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 CEPT1Q9Y6K0 416 aa18.45■□□□□ 0.54
PTCH1-210ENST00000468211 LOC100506127A0A0U1RQW1 187 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 RBMY1BA6NDE4 496 aaKnown RBP18.44■□□□□ 0.54
PTCH1-210ENST00000468211 RBMY1EA6NEQ0 496 aaKnown RBP18.44■□□□□ 0.54
PTCH1-210ENST00000468211 RBMY1DP0C7P1 496 aaKnown RBP18.44■□□□□ 0.54
PTCH1-210ENST00000468211 CTRB1P17538 263 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 RPL8P62917 257 aaKnown RBP18.44■□□□□ 0.54
PTCH1-210ENST00000468211 KLK9Q2XQG4 91 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 CTRB2Q6GPI1 263 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 OR4A47Q6IF82 309 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 LAX1Q8IWV1 398 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 WDR89Q96FK6 387 aaPredicted RBP18.44■□□□□ 0.54
PTCH1-210ENST00000468211 YTHDF1Q9BYJ9 559 aaKnown RBP18.44■□□□□ 0.54
PTCH1-210ENST00000468211 ZC4H2Q9NQZ6 224 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 KLK9Q9UKQ9 250 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 ETV7Q9Y603 341 aa18.44■□□□□ 0.54
PTCH1-210ENST00000468211 TRAV3A0A0B4J244 114 aa18.43■□□□□ 0.54
PTCH1-210ENST00000468211 LGALS9O00182 355 aa18.43■□□□□ 0.54
PTCH1-210ENST00000468211 HRASP01112 189 aa18.43■□□□□ 0.54
PTCH1-210ENST00000468211 PPYP01298 95 aa18.43■□□□□ 0.54
PTCH1-210ENST00000468211 HLA-GP17693 338 aa18.43■□□□□ 0.54
PTCH1-210ENST00000468211 ARL3P36405 182 aa18.43■□□□□ 0.54
PTCH1-210ENST00000468211 TIMM50Q3ZCQ8 353 aa18.43■□□□□ 0.54
PTCH1-210ENST00000468211 SPAG16Q8N0X2 631 aa18.43■□□□□ 0.54
PTCH1-210ENST00000468211 AUNIPQ9H7T9 357 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms