RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 NBDYA0A0U1RRE5 68 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 OR2T8A6NH00 312 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 NDUFA4O00483 81 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 DCTN3O75935 186 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 CRYGCP07315 174 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 IL6RP08887 468 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-203ENST00000467533 C4BPBP20851 252 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 DEFB131AP59861 70 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 KRTAP10-2P60368 255 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 LYPD1Q8N2G4 141 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 OR6M1Q8NGM8 313 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 ADTRPQ96IZ2 230 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 FAM210BQ96KR6 192 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 GABARAPL3Q9BY60 117 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 GABARAPL1Q9H0R8 117 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 RIMS4Q9H426 269 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-203ENST00000467533 TMEM14BQ9NUH8 114 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 ERVK13-1Q9NX77 482 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 SMPD3Q9NY59 655 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-203ENST00000467533 AASSQ9UDR5 926 aa7.31□□□□□ -1.24
HDAC3-203ENST00000467533 IGHV3-49A0A0A0MS15 119 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 TRBV6-6A0A0A6YYG2 114 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 IGKV1-6A0A0C4DH72 117 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 SNTNA6NMZ2 147 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 E7EUB6 86 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 GIG44P09565 113 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-203ENST00000467533 ZNF735P0CB33 412 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 SPP1P10451 314 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 PAFAH1B2P68402 229 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 PLA2G7Q13093 441 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 MEDAGQ5VYS4 303 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 XAF1Q6GPH4 301 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 RPL22L1Q6P5R6 122 aaKnown RBP7.3□□□□□ -1.24
HDAC3-203ENST00000467533 MORN3Q6PF18 240 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-203ENST00000467533 GIMAP1Q8WWP7 306 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 ATG101Q9BSB4 218 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 RHPN1-AS1Q9BWJ2 59 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 TMEM59Q9BXS4 323 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 YTHDF1Q9BYJ9 559 aaKnown RBP7.3□□□□□ -1.24
HDAC3-203ENST00000467533 PLEKHJ1Q9NW61 149 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 CLEC5AQ9NY25 188 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 SMPXQ9UHP9 88 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 AK3Q9UIJ7 227 aa7.3□□□□□ -1.24
HDAC3-203ENST00000467533 RBM7Q9Y580 266 aaKnown RBP7.3□□□□□ -1.24
HDAC3-203ENST00000467533 LINC00473A8K010 186 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 K7EMT4 169 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 CHEK1O14757 476 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 KBTBD11O94819 623 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 HTN3P15516 51 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 HTR2CP28335 458 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 DUTP33316 252 aaKnown RBP7.29□□□□□ -1.24
HDAC3-203ENST00000467533 FAM3BP58499 235 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-203ENST00000467533 FLOT2Q14254 428 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 KLK9Q2XQG4 91 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 Q499Y3 187 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 OR10K2Q6IF99 312 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 CDH26Q8IXH8 852 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 VKORC1L1Q8N0U8 176 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 SYT8Q8NBV8 401 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 TRUB1Q8WWH5 349 aaKnown RBP7.29□□□□□ -1.24
HDAC3-203ENST00000467533 GGHQ92820 318 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 BSCL2Q96G97 398 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-203ENST00000467533 OR51E2Q9H255 320 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 Q9N2K0 584 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 THYN1Q9P016 225 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 GHRLQ9UBU3 117 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 KLK9Q9UKQ9 250 aa7.29□□□□□ -1.24
HDAC3-203ENST00000467533 VPS13BQ7Z7G8 4022 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 TRBV5-5A0A0J9YX44 114 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 A0A1W2PPK0 400 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 C15orf62A8K5M9 175 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 BET1O15155 118 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 FCGR3BO75015 233 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 DFFBO76075 338 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 CD3GP09693 182 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 SRMP19623 302 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 CRHBPP24387 322 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 PTBP1P26599 531 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC3-203ENST00000467533 MAS1LP35410 378 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 SERPINB10P48595 397 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 ARFRP1Q13795 201 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 IRF3Q14653 427 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 CCDC58Q4VC31 144 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 OR2B11Q5JQS5 317 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 ZNF66Q6ZN08 573 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 TRPT1Q86TN4 253 aaKnown RBP7.28□□□□□ -1.24
HDAC3-203ENST00000467533 NKAIN3Q8N8D7 197 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 TMEM116Q8NCL8 245 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 VSTM2AQ8TAG5 236 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 SMIM19Q96E16 107 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 C12orf4Q9NQ89 552 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 MDFICQ9P1T7 246 aa7.28□□□□□ -1.24
HDAC3-203ENST00000467533 TCRBV3S1A0A5B6 114 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 TRDCB7Z8K6 153 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 DNASE2O00115 360 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-203ENST00000467533 RAB27BO00194 218 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 UBBP0CG47 229 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 SPART-AS1P0CW21 52 aa7.27□□□□□ -1.25
HDAC3-203ENST00000467533 SPSB3Q6PJ21 355 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms