RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 MEIS3P1A6NDR6 274 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 LYPD3O95274 346 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 SRP19P09132 144 aaKnown RBP6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 SUMO2P61956 95 aaKnown RBP6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 COL10A1Q03692 680 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 FAM78AQ5JUQ0 283 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 TPTE2P1Q5T6R2 138 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 TEX43Q6ZNM6 134 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 COX18Q8N8Q8 333 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 FGF13Q92913 245 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 SPANXCQ9NY87 97 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 FKBP11Q9NYL4 201 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 SPINT2O43291 252 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 OR7C2O60412 319 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 KBTBD11O94819 623 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 CLDN1O95832 211 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 NRASP01111 189 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 TFPI2P48307 235 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 DCAF12Q5T6F0 453 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 APOOQ9BUR5 198 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 OR52D1Q9H346 318 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 RBKSQ9H477 322 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 MRPL16Q9NX20 251 aaKnown RBP6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 TICRRQ7Z2Z1 1910 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 H3BSH0 61 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 M0R1B8 84 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 CLDN14O95500 239 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 REG1AP05451 166 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 RPL7P18124 248 aaKnown RBP6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 CFHR3Q02985 330 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 IGFL2Q6UWQ7 119 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 HOGA1Q86XE5 327 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 OR2K2Q8NGT1 345 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF689Q96CS4 500 aaPredicted RBP6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 TMEM59Q9BXS4 323 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF780BQ9Y6R6 833 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 SPAG17Q6Q759 2223 aa6.33□□□□□ -1.4
SPTBN1-204ENST00000467371 TRAV36DV7A0A075B6V5 113 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF736B4DX44 427 aaPredicted RBP6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 XKRYO14609 159 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 GABRA2P47869 451 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 TNFAIP6P98066 277 aaPredicted RBP6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 TFF2Q03403 129 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 NNATQ16517 81 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 ANXA2RQ3ZCQ2 193 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF429Q86V71 674 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF615Q8N8J6 731 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 TSTD1Q8NFU3 115 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 OR13A1Q8NGR1 328 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 NPFFR1Q9GZQ6 430 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 GPR84Q9NQS5 396 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 LAMTOR2Q9Y2Q5 125 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 TTRP02766 147 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 GALR1P47211 349 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 NCBP2P52298 156 aaKnown RBP eCLIP6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 FUT5Q11128 374 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 Q499Y3 187 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF684Q5T5D7 378 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 MFSD8Q8NHS3 518 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 CCL4L1Q8NHW4 92 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 AQP3Q92482 292 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 RARRES2Q99969 163 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 OR51B2Q9Y5P1 312 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 TDRD6O60522 2096 aaKnown RBP6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 RBFOX3A6NFN3 312 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 RHODO00212 210 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 RBFOX2O43251 390 aaKnown RBP eCLIP6.32□□□□□ -1.44e-11■■■■■ 31.8
SPTBN1-204ENST00000467371 ZNF708P17019 499 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 NPY1RP25929 384 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 NANOS3P60323 173 aaKnown RBP6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 TGIF2LYQ8IUE0 185 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 PATE1Q8WXA2 126 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 TMEM101Q96IK0 257 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 C2orf50Q96LR7 162 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 NRN1Q9NPD7 142 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 NAT8BQ9UHF3 227 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 COL6A3P12111 3177 aa6.32□□□□□ -1.4
SPTBN1-204ENST00000467371 CPSF4LA6NMK7 179 aaKnown RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 ZNF814B7Z6K7 855 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 K7N7A8 449 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 CYB5AP00167 134 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 HBZP02008 142 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 HSPB1P04792 205 aaKnown RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 CT45A6P0DMU7 189 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 CT45A5P0DMU8 189 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 CT45A7P0DMV0 189 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 PRTN3P24158 256 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 COL8A1P27658 744 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 BLVRBP30043 206 aaPredicted RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 HIST1H1AQ02539 215 aaPredicted RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 SMAGPQ0VAQ4 97 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 CT45A1Q5HYN5 189 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 CT45A3Q8NHU0 189 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 RNASE7Q9H1E1 156 aaKnown RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 ELL3Q9HB65 397 aaPredicted RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 KLK13Q9UKR3 277 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 PLA2G2DQ9UNK4 145 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 CHD3Q12873 2000 aaKnown RBP6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 WDFY3Q8IZQ1 3526 aa6.31□□□□□ -1.4
SPTBN1-204ENST00000467371 HEATR5AQ86XA9 2040 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms