RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TMEM97Q5BJF2 176 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 RASSF6Q6ZTQ3 369 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 TAC4Q86UU9 113 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 NAA40Q86UY6 237 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR11H2Q8NH07 326 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 MIEN1Q9BRT3 115 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 ZNF471Q9BX82 626 aaPredicted RBP1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 CXCL16Q9H2A7 254 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 IDI2-AS1Q9NZ38 188 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 MINOS1-NBL1R4GNA1 71 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 GRIN2BQ13224 1484 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 ZNF638Q14966 1978 aaKnown RBP1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 CHD5Q8TDI0 1954 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 MYO16Q9Y6X6 1858 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 IGHV3-15A0A0B4J1V0 119 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 MUC21A0A0G2JKD1 596 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 MUC21A0A140T8X8 626 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 VPS37CA5D8V6 355 aaPredicted RBP1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 FAM159BA6NKW6 160 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 UBE2L6O14933 153 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR5G3P0C626 314 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 UCHL3P15374 230 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 KCNE1P15382 129 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 EDDM3AQ14507 147 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 RSU1Q15404 277 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 ACOT6Q3I5F7 207 aaPredicted RBP1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 C1orf194Q5T5A4 169 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 SLC36A1Q7Z2H8 476 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 C1orf174Q8IYL3 243 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 DEFB125Q8N687 156 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 TEX47Q8TBZ9 253 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 SLC35G5Q96KT7 338 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 DCSTAMPQ9H295 470 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 GID8Q9NWU2 228 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 ARL2BPQ9Y2Y0 163 aa1.86□□□□□ -2.11
CDC42BPA-211ENST00000466538 MYH3P11055 1940 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 DICER1Q9UPY3 1922 aaKnown RBP1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 REREQ9P2R6 1566 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 IGHV1-69P01742 117 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 MAGEA12P43365 314 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 MARCKSL1P49006 195 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 CRYBA4P53673 196 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 SPCS3P61009 180 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 SS18Q15532 418 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 HIST2H3PS2Q5TEC6 136 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 LGALS9CQ6DKI2 356 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 C2orf91Q6ZV80 131 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 SLC51BQ86UW2 128 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 UBL4BQ8N7F7 174 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 Q8NDZ9 215 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR51D1Q8NGF3 324 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR2T4Q8NH00 348 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 FAM172AQ8WUF8 416 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 Q9BRP9 147 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 ARMC1Q9NVT9 282 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 MRPL27Q9P0M9 148 aaKnown RBP1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 PRELID3BQ9Y3B1 194 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 DENND4BO75064 1496 aaPredicted RBP1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 COL4A2P08572 1712 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 SYNMO15061 1565 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 PEG3Q9GZU2 1588 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 MTUS2Q5JR59 1369 aa1.85□□□□□ -2.11
CDC42BPA-211ENST00000466538 DISC1C4P0D8 188 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 PSMD12O00232 456 aaPredicted RBP1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 BHLHE40O14503 412 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR2B3O76000 313 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 S1PR2O95136 353 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 CD24P25063 80 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 RPL27AP46776 148 aaKnown RBP1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 XCL1P47992 114 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 SERPINB10P48595 397 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 CTBP2P56545 445 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 ARPC4P59998 168 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 FKBP1AP62942 108 aaKnown RBP1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 FAM78BQ5VT40 261 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 CNEP1R1Q8N9A8 125 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 CLDND2Q8NHS1 167 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 TMEM222Q9H0R3 208 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR51I2Q9H344 312 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 BOLA2Q9H3K6 86 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 CENPHQ9H3R5 247 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 FAM215AQ9Y5M1 114 aa1.84□□□□□ -2.11
CDC42BPA-211ENST00000466538 DOCK6Q96HP0 2047 aa1.84□□□□□ -2.12
CDC42BPA-211ENST00000466538 ZNF532Q9HCE3 1301 aa1.84□□□□□ -2.12
CDC42BPA-211ENST00000466538 HECW1Q76N89 1606 aa1.84□□□□□ -2.12
CDC42BPA-211ENST00000466538 DOCK3Q8IZD9 2030 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 KDM5BQ9UGL1 1544 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 CACNA1GO43497 2377 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 A0A1B0GW54 56 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 PQLC2LA1A4F0 135 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 EEF1E1-BLOC1S5C9J1V9 151 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 INMT-MINDY4F8WBC2 141 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 FAAHO00519 579 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 NOS1APO75052 506 aaPredicted RBP1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 APOMO95445 188 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 NPYP01303 97 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TNNC2P02585 160 aa1.83□□□□□ -2.12
CDC42BPA-211ENST00000466538 TTRP02766 147 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms