RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 TATDN3Q17R31 274 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF565Q8N9K5 539 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 OR8H1Q8NGG4 311 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 LEAP2Q969E1 77 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF2Q9BSG1 426 aaPredicted RBP11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 PSG11Q9UQ72 335 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 KLK5Q9Y337 293 aaPredicted RBP11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 NPIPB11E5RHQ5 1161 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 G3V318 75 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 BET1O15155 118 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 SPINT2O43291 252 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 RCC1P18754 421 aaPredicted RBP11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 GZMHP20718 246 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 MECP2P51608 486 aaKnown RBP11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 TAS2R31P59538 309 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 PRR20EP86478 221 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 PRR20CP86479 221 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 PRR20DP86480 221 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 PRR20BP86481 221 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 PRR20AP86496 221 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 DHRS11Q6UWP2 260 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 LHFPL1Q86WI0 220 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 OR13C8Q8NGS7 320 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 GIMAP1Q8WWP7 306 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 GALMQ96C23 342 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 FLYWCH2Q96CP2 140 aaKnown RBP11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 TAF9BQ9HBM6 251 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 GPN1Q9HCN4 374 aaPredicted RBP11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 WSB1Q9Y6I7 421 aa11.2□□□□□ -0.62
HMGXB4-206ENST00000466438 RGS11O94810 467 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 MOSP00540 346 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 GAPDHP04406 335 aaKnown RBP11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 SCTP09683 121 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 PGAM2P15259 253 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 FCGR2CP31995 323 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 BCAP31P51572 246 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 TMEM30BQ3MIR4 351 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 IGSF11Q5DX21 431 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 LPCAT3Q6P1A2 487 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 OR10X1Q8NGY0 326 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 ZFAND1Q8TCF1 268 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 MRGPRDQ8TDS7 321 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 IL1F10Q8WWZ1 152 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 SLC23A1Q9UHI7 598 aa11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 C14orf166Q9Y224 244 aaKnown RBP11.19□□□□□ -0.62
HMGXB4-206ENST00000466438 TRBV6-7A0A0A0MS04 114 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 CNIH1O95406 144 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 PPYP01298 95 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 HSPB1P04792 205 aaKnown RBP11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 IL5P05113 134 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 ZBTB25P24278 435 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 REG1BP48304 166 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 GNG10P50151 68 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 UBE2MP61081 183 aaKnown RBP11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 TMED4Q7Z7H5 227 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 PRR18Q8N4B5 295 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 MOB3AQ96BX8 217 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 PLEKHA3Q9HB20 300 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 FLVCR2Q9UPI3 526 aa11.18□□□□□ -0.62
HMGXB4-206ENST00000466438 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 C7orf66A4D0T2 115 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 ATP6V0E1O15342 81 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 CREBL2O60519 120 aaPredicted RBP11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 HBZP02008 142 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 CGB3P0DN86 165 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 CGB7P0DN87 165 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 CD1BP29016 333 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 UCP3P55916 312 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 AADACL3Q5VUY0 350 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 ZNF660Q6AZW8 331 aaPredicted RBP11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 SLC38A6Q8IZM9 456 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 OR13A1Q8NGR1 328 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 MARCH1Q8TCQ1 289 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 ARL11Q969Q4 196 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 ZNF486Q96H40 463 aaPredicted RBP11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 FXYD6Q9H0Q3 95 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 ALG5Q9Y673 324 aa11.17□□□□□ -0.62
HMGXB4-206ENST00000466438 DNAH6Q9C0G6 4158 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 TRAV39A0A0B4J263 110 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 OR5H14A6NHG9 310 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 SNRPGP15A8MWD9 76 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 PFDN1O60925 122 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 CTSDP07339 412 aaPredicted RBP11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 TRAPPC2P0DI81 140 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 TRAPPC2BP0DI82 140 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 NFYAP23511 347 aaPredicted RBP11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 S100GP29377 79 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 SSTR5P35346 364 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 F2RL1P55085 397 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 FXYD4P59646 89 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 HTD2P86397 168 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 C4orf46Q504U0 113 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 LCN12Q6JVE5 192 aa11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 GLDNQ6ZMI3 551 aaPredicted RBP11.16□□□□□ -0.62
HMGXB4-206ENST00000466438 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms