RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 C5orf56Q8N8D9 126 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 TEX45Q8NA69 505 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 OR4C16Q8NGL9 310 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 DDB2Q92466 427 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 TRIM63Q969Q1 353 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 PARP12Q9H0J9 701 aaKnown RBP5.5□□□□□ -1.53
CLDN4-204ENST00000466411 FXYD6Q9H0Q3 95 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 AKIP1Q9NQ31 210 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 SLC2A9Q9NRM0 540 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 FBXL7Q9UJT9 491 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 KCNIP3Q9Y2W7 256 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 RNF114Q9Y508 228 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 IGKV1D-13A0A0B4J2D9 117 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 H0Y980 276 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 K7EIL1 84 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 M0QYG6 137 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 CYB5BO43169 146 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 CHST1O43916 411 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 FCGR3BO75015 233 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 CRYZL1O95825 349 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 IGHG2P01859 326 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 OPN1MWP04001 364 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 RLN1P04808 185 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 IGF1P05019 195 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 OPN1MW2P0DN77 364 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 OPN1MW3P0DN78 364 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 IGKV1-13P0DP09 117 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 VDAC1P21796 283 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 GNRHRP30968 328 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 DHODHQ02127 395 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 KLF9Q13886 244 aaPredicted RBP5.49□□□□□ -1.53
CLDN4-204ENST00000466411 DIAPH2-AS1Q14236 149 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 POU2AF1Q16633 256 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 RNASE12Q5GAN4 147 aaKnown RBP5.49□□□□□ -1.53
CLDN4-204ENST00000466411 FAM209BQ5JX69 171 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 CASC10Q5T4H9 136 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 LIN54Q6MZP7 749 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF562Q6V9R5 426 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 Q6ZSV7 163 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 HSD17B13Q7Z5P4 300 aaPredicted RBP5.49□□□□□ -1.53
CLDN4-204ENST00000466411 SLC35E3Q7Z769 313 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 TMEM219Q86XT9 240 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 FAM219AQ8IW50 185 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 SGPP2Q8IWX5 399 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 MMD2Q8IY49 270 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 SPAG16Q8N0X2 631 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF383Q8NA42 475 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 OR4X2Q8NGF9 303 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 OR51S1Q8NGJ8 323 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 TINAGL1Q9GZM7 467 aaPredicted RBP5.49□□□□□ -1.53
CLDN4-204ENST00000466411 CCL28Q9NRJ3 127 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 TNFRSF19Q9NS68 423 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 C19orf73Q9NVV2 129 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 FKBP11Q9NYL4 201 aa5.49□□□□□ -1.53
CLDN4-204ENST00000466411 METTL1Q9UBP6 276 aaKnown RBP5.49□□□□□ -1.53
CLDN4-204ENST00000466411 IGHV3-72A0A0B4J1Y9 119 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 DUXBA0A1W2PPF3 345 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 MARCH11A6NNE9 402 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 LINC00473A8K010 186 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 MPPED1O15442 326 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 PGLYRP1O75594 196 aaPredicted RBP5.48□□□□□ -1.53
CLDN4-204ENST00000466411 DHFRP00374 187 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 IGLV2-14P01704 120 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 IGKV1-16P04430 117 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 IL7P13232 177 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 PIGPP57054 158 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 EIF4EBP1Q13541 118 aaPredicted RBP5.48□□□□□ -1.53
CLDN4-204ENST00000466411 HNF4GQ14541 408 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 PSG5Q15238 335 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 TMEM128Q5BJH2 165 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 UTF1Q5T230 341 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 SLC25A42Q86VD7 318 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 Q8N9W7 124 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 DRAXINQ8NBI3 349 aaPredicted RBP5.48□□□□□ -1.53
CLDN4-204ENST00000466411 DMBX1Q8NFW5 382 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 OR13C8Q8NGS7 320 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 OR51H1Q8NH63 302 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 LINC01006Q8NI28 216 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 IL22RA2Q969J5 263 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 SPIN2AQ99865 258 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 SPIN2BQ9BPZ2 258 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 SRSF8Q9BRL6 282 aaKnown RBP5.48□□□□□ -1.53
CLDN4-204ENST00000466411 PALMDQ9NP74 551 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 BET1LQ9NYM9 111 aa5.48□□□□□ -1.53
CLDN4-204ENST00000466411 SOX21Q9Y651 276 aaPredicted RBP5.48□□□□□ -1.53
CLDN4-204ENST00000466411 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 TEX13DA0A0J9YY54 714 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-204ENST00000466411 C3orf85A0A1B0GTC6 90 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 H3BUA1 57 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 PROP1O75360 226 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 SNAPC5O75971 98 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 KBTBD11O94819 623 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 OR2A4O95047 310 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 CNIH1O95406 144 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF735P0CB33 412 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 CD24P25063 80 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 CRIP2P52943 208 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-204ENST00000466411 RAB25P57735 213 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 PROK1P58294 105 aa5.47□□□□□ -1.53
CLDN4-204ENST00000466411 AKIRIN2Q53H80 203 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms