RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 H0YJW9 148 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 CA11O75493 328 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 GSTP1P09211 210 aaKnown RBP10.88□□□□□ -0.67
CXCR4-203ENST00000466288 EWSR1Q01844 656 aaKnown RBP eCLIP10.88□□□□□ -0.67
CXCR4-203ENST00000466288 TATDN3Q17R31 274 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 CD300EQ496F6 205 aaPredicted RBP10.88□□□□□ -0.67
CXCR4-203ENST00000466288 ZNF343Q6P1L6 599 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 CEMP1Q6PRD7 247 aaPredicted RBP10.88□□□□□ -0.67
CXCR4-203ENST00000466288 GLDNQ6ZMI3 551 aaPredicted RBP10.88□□□□□ -0.67
CXCR4-203ENST00000466288 JAGN1Q8N5M9 183 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 OR5T1Q8NG75 326 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 OVOL2Q9BRP0 275 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 METTL1Q9UBP6 276 aaKnown RBP10.88□□□□□ -0.67
CXCR4-203ENST00000466288 PEF1Q9UBV8 284 aaKnown RBP10.88□□□□□ -0.67
CXCR4-203ENST00000466288 MTFP1Q9UDX5 166 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 TMEM272A0A1B0GTI8 110 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 OR5H14A6NHG9 310 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 PRAF2O60831 178 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 CCNKO75909 580 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 OR2A4O95047 310 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 CD3GP09693 182 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 PRSS3P35030 304 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 PSG5Q15238 335 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 RPL39P5Q59GN2 51 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 OR2AK2Q8NG84 335 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 RNF5Q99942 180 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 KCNIP1Q9NZI2 227 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 TCRBP04435 133 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 MC5RP33032 325 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 SSBP2P81877 361 aaPredicted RBP10.87□□□□□ -0.67
CXCR4-203ENST00000466288 DEFA5Q01523 94 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 ARL6IP1Q15041 203 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 OR52I2Q8NH67 350 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 KCNG3Q8TAE7 436 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 MRPL30Q8TCC3 161 aaKnown RBP10.87□□□□□ -0.67
CXCR4-203ENST00000466288 PIPOXQ9P0Z9 390 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 WASHC3Q9Y3C0 194 aa10.87□□□□□ -0.67
CXCR4-203ENST00000466288 C7orf66A4D0T2 115 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 H7C2Y5 167 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 RAB29O14966 203 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 ST8SIA5O15466 376 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 AADACP22760 399 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 BTCP35070 178 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 FXYD3Q14802 87 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 RPEL1Q2QD12 228 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 SIGIRRQ6IA17 410 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 OR6F1Q8NGZ6 308 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 FAM46BQ96A09 425 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 GALMQ96C23 342 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 PARP12Q9H0J9 701 aaKnown RBP10.86□□□□□ -0.67
CXCR4-203ENST00000466288 ATG5Q9H1Y0 275 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 PEMTQ9UBM1 199 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 ZNF221Q9UK13 617 aa10.86□□□□□ -0.67
CXCR4-203ENST00000466288 TRAV18A0A075B6X5 111 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 A0A0J9YWU9 116 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 UBE2QL1A1L167 161 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 TMEM14DPA8MWL7 114 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 BOLA2-SMG1P6H3BVE0 249 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 GLAP06280 429 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 EIF2B2P49770 351 aaKnown RBP10.85□□□□□ -0.67
CXCR4-203ENST00000466288 BVESQ8NE79 360 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 GPX8Q8TED1 209 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 TINAGL1Q9GZM7 467 aaPredicted RBP10.85□□□□□ -0.67
CXCR4-203ENST00000466288 AUNIPQ9H7T9 357 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 HRASLSQ9HDD0 168 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 DNAH17Q9UFH2 4485 aa10.85□□□□□ -0.67
CXCR4-203ENST00000466288 DNAH11Q96DT5 4516 aa10.84□□□□□ -0.67
CXCR4-203ENST00000466288 RBMXL2O75526 392 aaKnown RBP10.84□□□□□ -0.67
CXCR4-203ENST00000466288 TBPP20226 339 aa10.84□□□□□ -0.67
CXCR4-203ENST00000466288 FUT3P21217 361 aa10.84□□□□□ -0.67
CXCR4-203ENST00000466288 QRFPP83859 136 aa10.84□□□□□ -0.67
CXCR4-203ENST00000466288 DEFB114Q30KQ6 69 aa10.84□□□□□ -0.67
CXCR4-203ENST00000466288 LGALS9CQ6DKI2 356 aa10.84□□□□□ -0.67
CXCR4-203ENST00000466288 TMEM229BQ8NBD8 167 aa10.84□□□□□ -0.67
CXCR4-203ENST00000466288 URM1Q9BTM9 101 aaKnown RBP10.84□□□□□ -0.67
CXCR4-203ENST00000466288 ZC4H2Q9NQZ6 224 aa10.84□□□□□ -0.67
CXCR4-203ENST00000466288 FAM90A7PA6NKC0 464 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 FAM90A23PA8MXZ1 464 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 SPDEFO95238 335 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 IGKV1-16P04430 117 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 H2AFB2P0C5Z0 115 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 AKAIN1P0CW23 69 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 TAS2R19P59542 299 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
CXCR4-203ENST00000466288 TNFRSF9Q07011 255 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 HMGN3Q15651 99 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 AWAT2Q6E213 333 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 GLIPR1L1Q6UWM5 242 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 TCTE3Q8IZS6 198 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 SNAPC3Q92966 411 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 ABHD14BQ96IU4 210 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 USMG5Q96IX5 58 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 TSNAXQ99598 290 aaKnown RBP10.83□□□□□ -0.68
CXCR4-203ENST00000466288 AGMATQ9BSE5 352 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 BANF2Q9H503 90 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 KLK5Q9Y337 293 aaPredicted RBP10.83□□□□□ -0.68
CXCR4-203ENST00000466288 ALG5Q9Y673 324 aa10.83□□□□□ -0.68
CXCR4-203ENST00000466288 PROP1O75360 226 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms