RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 CDC34P49427 236 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-217ENST00000466159 GNG10P50151 68 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 RND2P52198 227 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 NDUFA6P56556 154 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 TMEM241Q24JQ0 296 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 KRTCAP3Q53RY4 240 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 ZCCHC24Q8N2G6 241 aaKnown RBP7.36□□□□□ -1.23
SYNE1-217ENST00000466159 FAM210BQ96KR6 192 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 DOK5Q9P104 306 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 NAT8Q9UHE5 227 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 TCF19Q9Y242 345 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 TNCP24821 2201 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 TRAV20A0A0B4J274 112 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BKO60814 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 KBTBD11O94819 623 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 S100A9P06702 114 aaKnown RBP7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BJP06899 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 MYOD1P15172 320 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BOP23527 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BBP33778 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 RAB7AP51149 207 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BDP58876 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BCP62807 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 CCL8P80075 99 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST2H2BEQ16778 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 ACOT6Q3I5F7 207 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-217ENST00000466159 TREML4Q6UXN2 200 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 CYP2G1PQ6ZSU1 146 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 ZNF383Q8NA42 475 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 OR52E5Q8NH55 327 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 OR4S2Q8NH73 311 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 FAM216AQ8WUB2 273 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BHQ93079 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 RHOVQ96L33 236 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BNQ99877 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 HIST1H2BMQ99879 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 PARLQ9H300 379 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 MS4A5Q9H3V2 200 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 PATZ1Q9HBE1 687 aaKnown RBP7.36□□□□□ -1.23
SYNE1-217ENST00000466159 ZNRD1Q9P1U0 126 aa7.36□□□□□ -1.23
SYNE1-217ENST00000466159 KALRNO60229 2985 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 PTPRZ1P23471 2315 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-217ENST00000466159 A0A0G2JNJ9 132 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 PRSS46E5RG02 174 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 TMEM250H0YL14 139 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 KIR2DS2P43631 304 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 NUBP1P53384 320 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 RPP30P78346 268 aaKnown RBP7.35□□□□□ -1.23
SYNE1-217ENST00000466159 MRPS11P82912 194 aaKnown RBP7.35□□□□□ -1.23
SYNE1-217ENST00000466159 OR4A47Q6IF82 309 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 SPNS3Q6ZMD2 512 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 ZNF788Q6ZQV5 615 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 DOLPP1Q86YN1 238 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 C1orf87Q8N0U7 546 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 ZNF439Q8NDP4 499 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 ABHD17AQ96GS6 310 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 NCOR1P1Q9H4R4 102 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 MANBALQ9NQG1 85 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 Q9UFV3 132 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 SH3BGRL2Q9UJC5 107 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 GAB2Q9UQC2 676 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 ITGB1BP1O14713 200 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 APC2O95996 2303 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 HOXA5P20719 270 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 NPPCP23582 126 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
SYNE1-217ENST00000466159 PDLIM3Q53GG5 364 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-217ENST00000466159 C16orf82Q7Z2V1 217 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 WFDC8Q8IUA0 241 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 DIRC2Q96SL1 478 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 MGST2Q99735 147 aa7.35□□□□□ -1.23
SYNE1-217ENST00000466159 C15orf61A6NNL5 157 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 SEC14L6B5MCN3 397 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 TNFSF4P23510 183 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 COL8A2P25067 703 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 UBE2G2P60604 165 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 BSXQ3C1V8 233 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 MIC13Q5XKP0 118 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 CISD2Q8N5K1 135 aaKnown RBP7.34□□□□□ -1.23
SYNE1-217ENST00000466159 NECAP1Q8NC96 275 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 OR51G1Q8NGK1 321 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 ABHD5Q8WTS1 349 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 ZCCHC14Q8WYQ9 949 aaKnown RBP7.34□□□□□ -1.23
SYNE1-217ENST00000466159 C1orf159Q96HA4 380 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 NIT2Q9NQR4 276 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 IDI2-AS1Q9NZ38 188 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 PKDREJQ9NTG1 2253 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 A0A1W2PPV4 95 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 DPRXA6NFQ7 191 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 C11orf94C9JXX5 98 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 LY86O95711 162 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 OPN1MWP04001 364 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 OPN1MW2P0DN77 364 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 OPN1MW3P0DN78 364 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 IRF2P14316 349 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 THBS3P49746 956 aa7.34□□□□□ -1.23
SYNE1-217ENST00000466159 TMPRSS3P57727 454 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms